BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1062.p
         (349 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980536|ref|YP_001353981.1| ABC-type phosphate transport sy...   447   e-127

>gi|152980536|ref|YP_001353981.1| ABC-type phosphate transport
           system substrate-binding protein [Janthinobacterium sp.
           Marseille]
          Length = 347

 Score =  447 bits (1151), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/322 (70%), Positives = 270/322 (83%), Gaps = 1/322 (0%)

Query: 28  EITGAGASFPYPVYAKWAEQYKAATGNSLNYQSIGSGGGIKQIKAKTVDFGASDAPLPQS 87
           +ITGAGA+FPYP+Y+KWAE YKAATG  LNYQSIGSGGGIKQIKAKTVDFGASD PL + 
Sbjct: 27  DITGAGATFPYPIYSKWAESYKAATGTGLNYQSIGSGGGIKQIKAKTVDFGASDMPLKEE 86

Query: 88  ELAEAGLTQFPAVVGGVVPVVNLDGVTPGQIKLSGQVLGDIYAGKITKWNAPEITALNPG 147
           EL   GL QFPA++GGVVP+VNL+GV PGQ+K++ +VL +IY GKITKWN   ITALNPG
Sbjct: 87  ELEAEGLLQFPAIMGGVVPIVNLEGVAPGQLKMTPEVLANIYLGKITKWNDARITALNPG 146

Query: 148 VKLPNEDITVVYRSDASGTSYVFTSYLSKANADFKAKIGAGTAVKWPTGVGGKGNEGVAA 207
           VKL + DITVV+RSD SGT++++T +LSK NADFK  +GAGTAVKWP GVGGKGNEGVAA
Sbjct: 147 VKLTDSDITVVHRSDGSGTTFLWTDFLSKTNADFKEGVGAGTAVKWPAGVGGKGNEGVAA 206

Query: 208 NVQKVKGAIGYVEYAYVKKNKLNYTQLKNKDGNFVSPDDTSFKAATAHGDWAKTPGFAVD 267
           NVQ++KG+IGYVEYAY KKNK+++TQLKN+DG FV PDD +FKAA A  DWAKTPG  V 
Sbjct: 207 NVQRIKGSIGYVEYAYAKKNKMSHTQLKNRDGQFVQPDDETFKAAAAGADWAKTPGMGVI 266

Query: 268 FTDAAGKESWPISSATFILLHKQQDGDGAKGKEVLKFFDWAYKNGGKTAAELDYVPLPDS 327
            T+ AGK SWPI+ A+FILLHK Q     + KEVLKFFDW+YKNGG  AA+LDYV +P  
Sbjct: 267 LTNQAGKSSWPITGASFILLHKSQ-ASAERAKEVLKFFDWSYKNGGAMAADLDYVAMPAP 325

Query: 328 VTKLVEESWKSNVKDSSGKAIW 349
           V KLV+++WK++VKD+SGKA+W
Sbjct: 326 VVKLVQDAWKASVKDASGKAVW 347


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.312    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 784,930
Number of extensions: 31688
Number of successful extensions: 68
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 265
Effective length of database: 910,473
Effective search space: 241275345
Effective search space used: 241275345
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 130 (54.7 bits)