BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1056.p
         (350 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980847|ref|YP_001353987.1| glycosysltransferase [Janthinob...   493   e-141

>gi|152980847|ref|YP_001353987.1| glycosysltransferase
           [Janthinobacterium sp. Marseille]
          Length = 349

 Score =  493 bits (1269), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 229/332 (68%), Positives = 272/332 (81%)

Query: 1   MRIAIISDAGEPQVNGVVNTLRSTVRCLRGFGHEVLLLSPRDFRTFACPTYPEIRLAYKP 60
           MRIAI++DA EPQVNGVVNTL++T + LR  GH VL+++P + R+++CPTYPEIRLAYKP
Sbjct: 1   MRIAIVTDAWEPQVNGVVNTLKATRKQLRANGHAVLMVTPENMRSYSCPTYPEIRLAYKP 60

Query: 61  YARIAAALEAFQPDCIHIATEGPMGLAARRYCLRHKLNFTTAYHTRFPEYLAARKLLPKA 120
           YA++AAALE F PDCIHIATEGPMGLAARR+C+   L+FTTAYHTRFPEYL  R  LP A
Sbjct: 61  YAKVAAALEDFDPDCIHIATEGPMGLAARRFCINRGLDFTTAYHTRFPEYLRTRFHLPLA 120

Query: 121 ITYRLLRWFHGRSEAIMVPTPAMKTALEEEGFRNVVLWGRGVDTNHFRPAVEDHACIERP 180
           +TYR L+WFH  ++A+MVPTP M+ ALE+ GF+NVV W RGVDT++FRP   +    ERP
Sbjct: 121 LTYRWLKWFHRPAKAVMVPTPRMQDALEKSGFKNVVQWSRGVDTDYFRPGQHEEVTHERP 180

Query: 181 LFLYVGRVAVEKNIEAFLQLDLPGTKWVVGDGPQFEDLSTRYPEVRFLGAKGHDELPAYY 240
           L+LYVGRVAVEKNIEAFLQ++LPG KWV+GDGP  E+L  +YP+V FLGAK HD LPAYY
Sbjct: 181 LYLYVGRVAVEKNIEAFLQMELPGAKWVIGDGPMREELEKKYPDVHFLGAKPHDALPAYY 240

Query: 241 NCADVFVFPSKTDTFGLVLLEAMACGIPVAAYPVEGPIDVVDNGVSGILRQDLKQACLQA 300
           NCADVFVFPS+TDTFGLVL+EAMACG+PVAAYPVEGPIDVV  G SG+L +DL +AC +A
Sbjct: 241 NCADVFVFPSRTDTFGLVLVEAMACGVPVAAYPVEGPIDVVAQGKSGVLHEDLMRACFEA 300

Query: 301 LKLDNEAVRAHAATRSWESATQQFLQHLHLAR 332
           L L    VR HA   SW +ATQQFL HLH  R
Sbjct: 301 LNLKRSVVREHALHYSWSTATQQFLAHLHPVR 332


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.139    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 845,109
Number of extensions: 35149
Number of successful extensions: 98
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 266
Effective length of database: 910,473
Effective search space: 242185818
Effective search space used: 242185818
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 130 (54.7 bits)