BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1054.p
         (255 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980845|ref|YP_001353989.1| hemolysin-like protein [Janthin...   412   e-116

>gi|152980845|ref|YP_001353989.1| hemolysin-like protein
           [Janthinobacterium sp. Marseille]
          Length = 255

 Score =  412 bits (1058), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 191/255 (74%), Positives = 222/255 (87%)

Query: 1   MRLLTIPADANPSFAKLNLSLASTPEEVREVQRLRYKVFIEAMNLSALANPEGLDKDEFD 60
           MRLL   AD N + +KL LSLAST +EVREVQRLRYKVFIE+M LS+L N E LDKDEFD
Sbjct: 1   MRLLNASADTNLASSKLTLSLASTQKEVREVQRLRYKVFIESMGLSSLKNEERLDKDEFD 60

Query: 61  DYCDHLIVRDSKTLSVVGTYRVLSPHGARRMGKFYSEQEFDLSRLDNIRGVIAEAGRACI 120
            YCDHLIVRDS+TL VVGTYRV+SP  AR+MG+FYSEQEFDLSRL+N+R  IAEAGRACI
Sbjct: 61  AYCDHLIVRDSETLKVVGTYRVMSPQAARKMGQFYSEQEFDLSRLNNLRNRIAEAGRACI 120

Query: 121 HPDYRSGGVIMMLWAGLAAYMRKERCEYLMGCASVSLADGGHNAAALYHAFREKNMAPPD 180
           HPDYRSG VIM+LWAGLAA+M+KE+CEYL+GCASVSLADGGHNAAALYH+  E N+AP +
Sbjct: 121 HPDYRSGAVIMLLWAGLAAFMKKEKCEYLIGCASVSLADGGHNAAALYHSLAENNLAPAE 180

Query: 181 YRVAPLLPFPLEDRQAGVDPQIPPLLRGYLRSGAWVCGEPAWDPDFHSADFFLLLPLSKL 240
           YRV P LPFP+ +R+AG    +PPL++GYLRSGAWVCG PAWDPDFHSAD F++LPL+KL
Sbjct: 181 YRVTPHLPFPIAEREAGHVAVVPPLIKGYLRSGAWVCGNPAWDPDFHSADLFMMLPLAKL 240

Query: 241 DSRYARHYLKDSRTA 255
           DSRYARHYLK+++ A
Sbjct: 241 DSRYARHYLKEAQPA 255


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 633,123
Number of extensions: 26197
Number of successful extensions: 63
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 174
Effective length of database: 921,564
Effective search space: 160352136
Effective search space used: 160352136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)