BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1021.p (566 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981189|ref|YP_001353307.1| hemolysin activation/secretion ... 375 e-105 gi|152981103|ref|YP_001352452.1| hemolysin activation/secretion ... 301 5e-83 gi|152981319|ref|YP_001355011.1| hemolysin activation/secretion ... 94 3e-20 gi|152981372|ref|YP_001353395.1| hemolysin activation/secretion ... 84 2e-17 gi|152981377|ref|YP_001351699.1| hemolysin activation/secretion ... 84 3e-17 >gi|152981189|ref|YP_001353307.1| hemolysin activation/secretion signal peptide protein [Janthinobacterium sp. Marseille] Length = 563 Score = 375 bits (963), Expect = e-105, Method: Compositional matrix adjust. Identities = 231/541 (42%), Positives = 320/541 (59%), Gaps = 13/541 (2%) Query: 16 PIAAALVLAGL-APLASAQTPPDAGTILQQLQ--PALPAPPASSAPSLKLEPRAESALP- 71 P AL L L + ++AQT P+AG IL++LQ P L AP A P+L++E R +A Sbjct: 11 PFLCALTLTLLYSTNSTAQTLPNAGQILRELQQQPELVAPKA--GPTLEVEERTLNATAD 68 Query: 72 QSAPFEVKRLQITGNTVFATESLHELVAGEEGKSLTLAQVNTLAERITRYYHQQGYPLAR 131 Q + F +K + ITGNT F LH LV+ EG + TL +N AERIT YY +QGYP+AR Sbjct: 69 QGSSFALKTITITGNTTFTQAELHALVSDLEGGTRTLKDLNAAAERITVYYREQGYPVAR 128 Query: 132 AIIPAQTIRDGVVVIQVVEARYGQVRLNNQSAVRDGLLQATLDGLQSGAVIEDDALNRSL 191 A +PAQ I+DGVV I VVE R +LNN+S + D A LD G VI D+++R L Sbjct: 129 AYLPAQEIKDGVVTIAVVEGRIAARQLNNKSHLSDERAAAYLDRSGKGGVIRSDSIDRGL 188 Query: 192 LLLSDVPGVAVA-ATLQPGASVGSSDVTVNTTTNPTTLGTVALDNYGNRYIDRVRVSGNL 250 LLL+D PGV A ATLQPGASVG+SD+ V G + DNYGNRY+ R+ G L Sbjct: 189 LLLNDTPGVTNARATLQPGASVGTSDLVVQLEPGAAYSGNIDFDNYGNRYVGAYRLGGTL 248 Query: 251 NVVNPLRHGDLLSATVLSTGSGMNYGRLSYDILVNGQGTHIGTAYSYLRYKLGSELSALG 310 N+ +PL+ GD+L+A VL++GSG+NYGR++Y + V G +G AY RY+L E L Sbjct: 249 NINSPLQIGDVLTANVLTSGSGLNYGRVAYQLPVGSDGLRVGAAYFETRYELDKEFKRLD 308 Query: 311 ANGTASVVSLWGRHPLLRSREANVYAQLQLDGKRLHDHVDASALRTDRHLLNWVMSLNGD 370 A+GTAS S++ +P +RS+ +N+ L + K L D VDA+A TD+ L G Sbjct: 309 AHGTASSASIFAAYPFIRSQFSNLNGTLSWEQKNLSDSVDATATTTDKRAKLLTAGLFGT 368 Query: 371 IRDNLLAGGISIWSLGWTSGRVFFDDAAAASADAAAGQTRGGFAKWNANFSRLQGISQRD 430 +D GGI+ SL G++ A+A D A+ +T G +++W+ N +RLQ IS + Sbjct: 369 RQDAFGGGGINSLSLSAIFGQLDIKSASALIIDNASAKTNGNYSRWSYNLARLQRISDSN 428 Query: 431 AVYLNLAAQWSDRNLDSAEKMTAGGPYTVRAYDIGAMSGDIGYVGTIEWRHELGNAWSGQ 490 ++YL ++ Q + +NLDS+EK GG VRAY G GD G + +IE RH G Sbjct: 429 SLYLTVSGQEAGKNLDSSEKFALGGATGVRAYPQGEGIGDEGVLASIELRHTFMTGLQGS 488 Query: 491 WQAIAFLDSAYVKVNQRQWTSGE-NSGSLSGAGVGMN-WSGPDQWRASVSVATRVGARPS 548 F D+ VK+N + + N+ +LSGAGVG+N + Q +AS++ T GA S Sbjct: 489 ----VFYDTGSVKINHTPFGPPQTNTRTLSGAGVGVNAFLANVQIKASLAWRTYGGAPTS 544 Query: 549 I 549 I Sbjct: 545 I 545 >gi|152981103|ref|YP_001352452.1| hemolysin activation/secretion signal peptide protein [Janthinobacterium sp. Marseille] Length = 565 Score = 301 bits (772), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 207/553 (37%), Positives = 294/553 (53%), Gaps = 8/553 (1%) Query: 20 ALVLAGLAPLASAQTPPDAGTIL---QQLQPALPAPPASSAPSLKLEPRAESALPQSAPF 76 AL L+ + +A AQ P+AG+ L QQ PALP P A+ L EP A S F Sbjct: 15 ALCLSS-STVALAQVLPNAGSTLRESQQSAPALPMP-ATGTIQLPPEPPAPVPTVDSIRF 72 Query: 77 EVKRLQITGNTVFATESLHELVAGEEGKSLTLAQVNTLAERITRYYHQQGYPLARAIIPA 136 +V+ +I+GN + L LV G +L ++ A RIT YY + GY +ARA IPA Sbjct: 73 QVQAFRISGNQSIDSALLLPLVQDVTGAERSLGELEQAASRITAYYREHGYLVARAYIPA 132 Query: 137 QTIRDGVVVIQVVEARYGQVRLNNQSAVRDGLLQATLDGLQSGAVIEDDALNRSLLLLSD 196 Q I+ GVV I V+E Y +VRL+NQS D +LQ L Q G + D L R++LL+ D Sbjct: 133 QDIQGGVVEITVLEGHYDKVRLDNQSGFSDAILQRYLTPQQLGETVNDAELERAILLIQD 192 Query: 197 VPGVAVAA-TLQPGASVGSSDVTVNTTTNPTTLGTVALDNYGNRYIDRVRVSGNLNVVNP 255 V A A LQPGA G++D+T+ P + DNYG R R R G + NP Sbjct: 193 VTQAAQAGGNLQPGALPGTTDLTLKVGPAPGWQARLEADNYGVRNTGRNRFGGAVQWNNP 252 Query: 256 LRHGDLLSATVLSTGSGMNYGRLSYDILVNGQGTHIGTAYSYLRYKLGSELSALGANGTA 315 + D L A V +T G +Y RL Y I V G G +G AY RY++G + +AL A G A Sbjct: 253 TGNADRLDARVFTTADGQDYARLGYSIAVGGDGLRLGLAYVESRYQVGGDFAALDAYGRA 312 Query: 316 SVVSLWGRHPLLRSREANVYAQLQLDGKRLHDHVDASALRTDRHLLNWVMSLNGDIRDNL 375 V S +PL RSR+ N+ + LD K L D+V A A T + + L+GD+R+ + Sbjct: 313 GVWSATASYPLRRSRDFNLNLEAGLDQKSLQDNVGAFASSTRKSNQVAGLGLSGDVRNRI 372 Query: 376 LAG-GISIWSLGWTSGRVFFDDAAAASADAAAGQTRGGFAKWNANFSRLQGISQRDAVYL 434 + G + +SL SGR+ + A DA + +T G + ++ ++ Q + + L Sbjct: 373 ASSEGTTTFSLRAESGRLDIETPLAREIDALSARTNGAYQRYTYALAQYQWLGNSTMLLL 432 Query: 435 NLAAQWSDRNLDSAEKMTAGGPYTVRAYDIGAMSGDIGYVGTIEWRHELGNA-WSGQWQA 493 ++ Q + +NLDSAEKM+ GGP+ VRAY G SGD GYV T E RH L GQ Sbjct: 433 SVNGQQASKNLDSAEKMSLGGPFAVRAYPSGEASGDKGYVATAEIRHTLDQQLLPGQLML 492 Query: 494 IAFLDSAYVKVNQRQWTSGENSGSLSGAGVGMNWSGPDQWRASVSVATRVGARPSIVASQ 553 F+DS V+ N + + G+N LSGAGVG++++ ++ + A ++GA + + Sbjct: 493 SGFVDSGMVETNAKPFIQGDNQRRLSGAGVGLSFAMQNRLELRLMYAHKIGAATARSDTD 552 Query: 554 PSVRGWVTLSKAF 566 S R W L+ F Sbjct: 553 RSGRIWGMLAFMF 565 >gi|152981319|ref|YP_001355011.1| hemolysin activation/secretion protein [Janthinobacterium sp. Marseille] Length = 563 Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 125/523 (23%), Positives = 220/523 (42%), Gaps = 45/523 (8%) Query: 49 LPAPPASSAPSLKLEPRAESALPQSAPFEVKRLQITGNTVFATESL-HELVAGE----EG 103 LP S AP++ ++ + ++ P R+ + + ES+ ELVA E Sbjct: 43 LPKLEPSPAPTVTVDIQPQALDPAMQRLLASRIVPSRFKIAGVESIPFELVAAEFSPLTN 102 Query: 104 KSLTLAQVNTLAERITRYYHQQGYPLARAIIPAQTIRDGVVVIQVVEARYGQVRLNNQSA 163 + +T+A++ A ++T+ Y +GYPL+ A +PAQ+ +D +V I VVE V++ Sbjct: 103 REVTVAELLQAANKVTQIYQAKGYPLSFAFVPAQSFKDNIVEINVVEGYVSTVKIEGNPG 162 Query: 164 VRDGLLQATLDGLQSGAVIEDDALNRSLLLLSDVPGVAVAATLQPGASV-GSSDVTVNTT 222 + L+ + L++ + D +R +LS PG+ + AT++P + G+S++T+ + Sbjct: 163 ASEERLRNIAEQLKADRPLSRDTFDRITSVLSLQPGMRIKATVRPPENTDGASEMTLEVS 222 Query: 223 TNPTTLGTVALDNYGNRYIDRVRVSGNLNVVNPLRHGDLLSATVLSTGSGMNYGRLSYDI 282 P T + A+D + R S N + PL LS S Y L+Y Sbjct: 223 RKPVTT-SFAVDTATSSL--RGIFSVTENGLTPLGEQVTLSTIAPRGPSREEYVGLNYIQ 279 Query: 283 LVNGQGTHIGTAYSYLRYKLGSELSALGANGTASVVSLWGRHPLLRSR-EANVYAQLQLD 341 + QG + S YK E AL A L R+ R AN+ L L Sbjct: 280 PIRWQGMLLQVTLS--DYKGEPENQALTAQ------QLQSRYQTKTQRVSANLSYPLILK 331 Query: 342 GKR-------LHDHVDASALRTDRHLLNWVMSLNGDIRD---NLLAGGIS-----IWSLG 386 R ++ ++S D + + DIR L + +S WSLG Sbjct: 332 PTRSLTLSGGIYAVKNSSRYTLDVPAPAPSIEFSSDIRALSLELTSTEVSDRSSTQWSLG 391 Query: 387 WTSGRVFFDDAAAASADAAAGQTRGGFAKWNANFSRLQGISQRDAVYLNLAAQWSDRNLD 446 G FD A + G F + +F+R + + ++ Q+S L Sbjct: 392 VYQG---FDSMGARQVN---GNIDLDFLRIKGSFTRSNQFANGYGITVSGMGQYSSNILP 445 Query: 447 SAEKMTAGGPYTVRAYDIGAMSGDIGYVGTIEWRHEL--GNAWSGQWQAIAFLDSAYVKV 504 +E+++ G AY +G ++GD G+ ++E+ ++ + Q D+A V V Sbjct: 446 LSEQVSFGAKLYGLAYPVGEIAGDKGWGASLEFNRAFPYDGSYVKRIQPYVMADAAKVYV 505 Query: 505 NQRQWTSGENSGSLSGAGVGMNWSGPDQWRASVSVATRVGARP 547 N + E ++ G G+ ++ + +S+A VG P Sbjct: 506 NAGRLAHSE----IASVGTGVRFTDLRHYSLDLSIAQPVGEIP 544 >gi|152981372|ref|YP_001353395.1| hemolysin activation/secretion protein [Janthinobacterium sp. Marseille] Length = 526 Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 107/458 (23%), Positives = 184/458 (40%), Gaps = 29/458 (6%) Query: 66 AESALPQSAPFEVKRLQITGNTVFATESLHELVAGEEGKSLTLAQVNTLAERITRYYHQQ 125 A+++ P S F++ R + GNT+ +++ LVA GK A V E + YH + Sbjct: 23 ADTSKP-SIHFDINRFDVRGNTLLPPQTVDRLVAPYLGKDRDFADVMKALEALEAAYHAR 81 Query: 126 GYPLARAIIPAQTIRDGVVVIQVVEARYGQVRLNNQSAVRDGLLQATLDGLQSGAVIEDD 185 GY L R +P Q + G VV+ VV+A+ G V + S D ++ +L LQ G + Sbjct: 82 GYQLVRIDLPEQELNQGTVVLNVVQAKIGNVVIEGNSHFDDANIRRSLPALQEGQTPDLK 141 Query: 186 ALNRSLLLLSDVPGVAVAATLQPGASVGSSDVTVNTTTNPTTLGTVALDNYGNRYIDRVR 245 A+++SL L ++ P V ++ + T+ T+ DN G R R Sbjct: 142 AVSKSLKLANENPAKKVTMRMKSAEQDDEVEATLAVVDESVWRTTINFDNTGVASTGRTR 201 Query: 246 VSGNLNVVNPLRHGDLLS---ATVLSTGSGMNYGRLSYDILVNGQGTHIGTAYSYLRYKL 302 L N ++S T L S + + Y I + G + SY Sbjct: 202 AGVVLQNANMFGLDHVMSLQYTTTLEEPSRVGVYGVGYHIPLYALGDSMDFYASY----- 256 Query: 303 GSELSALGANGTASVVSLWGRHPLLRSREANVYAQLQLDGKRLHDHVDASALRTDRHLLN 362 S++ A +++ G+ + +R A + +L +D + LL Sbjct: 257 -SDVDAGTVTAGIFDIAVSGKGSMYGARYNQNLATVGNYASKLMYGIDLKQYKNSMQLLG 315 Query: 363 WVMSLNGDIRDNLLAGGIS-IWSLGWTSGRVFFDDAAAASADAAAGQTRGGFAKW----N 417 + L DI ++ G WS W G + F + + ++ F + Sbjct: 316 --VELGADITVRPVSVGYQGDWS--WGDGAIGFATTLLHNISGGSNGSQSDFDRVRFDAK 371 Query: 418 ANFSRL-------QGISQRDAVYLNLAAQWSDRNLDSAEKMTAGGPYTVRAYDIGAMSGD 470 AN++ + Q + ++ + Q++ L E+ AGG +VR + ++ D Sbjct: 372 ANYTAIRVGGSLTQALPEQWLARAIINGQYTKDALIPGEQFGAGGAASVRGFLEREVAND 431 Query: 471 IGYVGTIEWRHELGNAWSGQWQ--AIAFLDSAYVKVNQ 506 G G E + SG+WQ A+AF D AY+ N Sbjct: 432 SGITGNFEV-YTAPLCGSGKWQCRALAFYDHAYLTRNH 468 >gi|152981377|ref|YP_001351699.1| hemolysin activation/secretion protein [Janthinobacterium sp. Marseille] Length = 526 Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 107/458 (23%), Positives = 185/458 (40%), Gaps = 29/458 (6%) Query: 66 AESALPQSAPFEVKRLQITGNTVFATESLHELVAGEEGKSLTLAQVNTLAERITRYYHQQ 125 A+++ P S F++ R + GNT+ ++++ LVA GK A V E + YH + Sbjct: 23 ADTSNP-SIHFDINRFDVRGNTLLPSQTVDSLVAPYLGKDRDFADVMKALEALEAAYHAR 81 Query: 126 GYPLARAIIPAQTIRDGVVVIQVVEARYGQVRLNNQSAVRDGLLQATLDGLQSGAVIEDD 185 GY L R +P Q + G VV+ VV+A+ G V + S D ++ +L LQ G + Sbjct: 82 GYQLVRIDLPEQELNQGTVVLNVVQAKIGNVVIEGNSHFDDANIRRSLPALQEGQTPDLK 141 Query: 186 ALNRSLLLLSDVPGVAVAATLQPGASVGSSDVTVNTTTNPTTLGTVALDNYGNRYIDRVR 245 A+++SL L ++ P V ++ + T+ T+ DN G R R Sbjct: 142 AVSKSLKLANENPAKKVTMRMKSAEQDDEVEATLAVVDESVWRTTINFDNTGVASTGRTR 201 Query: 246 VSGNLNVVNPLRHGDLLS---ATVLSTGSGMNYGRLSYDILVNGQGTHIGTAYSYLRYKL 302 L N ++S T L S + + Y I + G + SY Sbjct: 202 AGVVLQNANMFGLDHVMSLQYTTTLEEPSRVGVYGVGYHIPLYALGDSMDFYASY----- 256 Query: 303 GSELSALGANGTASVVSLWGRHPLLRSREANVYAQLQLDGKRLHDHVDASALRTDRHLLN 362 S++ A +++ G+ + +R A + +L +D + LL Sbjct: 257 -SDVDAGTVTAGIFDIAVSGKGSMYGARYNQNLATVGNYASKLMYGIDLKQYKNSMQLLG 315 Query: 363 WVMSLNGDIRDNLLAGGIS-IWSLGWTSGRVFFDDAAAASADAAAGQTRGGFAKW----N 417 + L DI ++ G WS W G + F + + ++ F + Sbjct: 316 --VELGADITVRPVSIGYQGDWS--WGDGAIGFATTLLHNISGGSNGSQSDFDRVRFDAK 371 Query: 418 ANFSRL-------QGISQRDAVYLNLAAQWSDRNLDSAEKMTAGGPYTVRAYDIGAMSGD 470 AN++ + Q + ++ + Q++ L E+ AGG +VR + ++ D Sbjct: 372 ANYTAIRVGGSLTQALPEQWLARAIINGQYTKDALIPGEQFGAGGAASVRGFLEREVAND 431 Query: 471 IGYVGTIEWRHELGNAWSGQWQ--AIAFLDSAYVKVNQ 506 G G E + SG+WQ A+AF D AY+ N Sbjct: 432 SGITGNFEV-YTAPLCGSGKWQCRALAFYDHAYLTRNH 468 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.315 0.131 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,245,985 Number of extensions: 51448 Number of successful extensions: 192 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 184 Number of HSP's successfully gapped: 5 Length of query: 566 Length of database: 1,221,021 Length adjustment: 88 Effective length of query: 478 Effective length of database: 895,685 Effective search space: 428137430 Effective search space used: 428137430 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)