BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0974.p
         (680 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980767|ref|YP_001354265.1| membrane-bound proton-transloca...  1136   0.0  

>gi|152980767|ref|YP_001354265.1| membrane-bound
           proton-translocating pyrophosphatase [Janthinobacterium
           sp. Marseille]
          Length = 715

 Score = 1136 bits (2938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/680 (86%), Positives = 646/680 (95%), Gaps = 3/680 (0%)

Query: 1   MALALWFAIACGLVAVIYGLVSRSWVLKQDPGNPRMQEIALAIQQGAAAYLARQYRTIAM 60
           MAL+LWFAIACG++AV+YGL+SRSW+LKQD GN RMQEIA AIQQGAAAYLARQYRTIA+
Sbjct: 1   MALSLWFAIACGIIAVVYGLISRSWILKQDAGNERMQEIAAAIQQGAAAYLARQYRTIAI 60

Query: 61  VGVVLLIVIAVIPGLGWLTAIGFLLGSVLSGACGFIGMNVSVRANVRTAQAATRGMNEAL 120
           VGVVL I+IA++PGLG +TA+GFL G+VLSGACGFIGMNVSVRANVRTAQAAT+GMNEAL
Sbjct: 61  VGVVLFIIIALVPGLGLMTALGFLTGAVLSGACGFIGMNVSVRANVRTAQAATKGMNEAL 120

Query: 121 GVAFRGGAITGMLVVGLGLLGVSLFFWALFVYGQGRAA---SLHDAIQPLIGLAFGASLI 177
            VAF+GGAITGMLVVGLGLLGV++FF  L     G  A   +LHD I PLIGLAFGASLI
Sbjct: 121 DVAFKGGAITGMLVVGLGLLGVAIFFMILTAMASGAGAYHLTLHDVITPLIGLAFGASLI 180

Query: 178 SIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFE 237
           SIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFE
Sbjct: 181 SIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFE 240

Query: 238 TYVVTLVATMLLGSLMLKGMETLAVLYPLALGGVSILASIVGCAMVKAQPGKKIMAALYT 297
           TYVVTL+ATMLLG+L+++GME  A +YPL LGGVSILASIVGC+MVKA+PGKKIM+ALYT
Sbjct: 241 TYVVTLIATMLLGTLVMQGMELQAAIYPLLLGGVSILASIVGCSMVKAKPGKKIMSALYT 300

Query: 298 GLWWAAGLSLLGFAAVTWLLLPPELRLPLMGAAVVGIVLTGLMVYITEYYTGTDFKPVRH 357
           GLWWAA LSL+GFA VTWL++PP L+L +MG+AVVGIVLTGLMVYITEYYTGTDFKPV+H
Sbjct: 301 GLWWAAALSLIGFAVVTWLVIPPPLQLAMMGSAVVGIVLTGLMVYITEYYTGTDFKPVQH 360

Query: 358 IAEASTTGHGTNIIAGLGVSMKSTAYPVLAVCAAILASYWLAGLYGIAIAATSMLSMAGI 417
           +A+ASTTGHGTNIIAGLGVSM+STA+PV++VCAAILASYWL GLYGIAIAAT+MLSMAGI
Sbjct: 361 VAQASTTGHGTNIIAGLGVSMRSTAWPVVSVCAAILASYWLGGLYGIAIAATAMLSMAGI 420

Query: 418 VVALDAYGPITDNAGGIAEMSGLPDSVRAITDPLDAVGNTTKAVTKGYAIGSAGLAALVL 477
           +VALDAYGPITDNAGGIAEMSG+P+SVRAITDPLDAVGNTTKAVTKGYAIGSAGLAALVL
Sbjct: 421 IVALDAYGPITDNAGGIAEMSGMPESVRAITDPLDAVGNTTKAVTKGYAIGSAGLAALVL 480

Query: 478 FADYTHALESVGKTASFDLSSPAVIIGLFIGGLIPYLFGAMAMEAVGRAAGAVVVEVRRQ 537
           FADYTHAL+SVGK+ SFDLS+P VI+GLFIGGLIPYLFGAMAMEAVGRAAGAVVVEVRRQ
Sbjct: 481 FADYTHALDSVGKSTSFDLSNPMVIVGLFIGGLIPYLFGAMAMEAVGRAAGAVVVEVRRQ 540

Query: 538 FRDIAGIMDGSGRPEYDRAVDMLTSSAIREMILPSLLPVIVPILVGLLLGPSALGGLLMG 597
           FRDI GIMDGSG+PEYD+AVDMLT++AI+EMI+PSLLPV+VPILVGL+LGP+ALGGLLMG
Sbjct: 541 FRDIKGIMDGSGKPEYDKAVDMLTTAAIKEMIIPSLLPVVVPILVGLILGPAALGGLLMG 600

Query: 598 TIVTGLFVAISMTTGGGAWDNAKKYIEDGHHGGKGSDAHKAAVTGDTVGDPYKDTAGPAV 657
            IVTG+FVAISMTTGGGAWDNAKKYIEDG+HGGKGS+AHKAAVTGDTVGDPYKDTAGPAV
Sbjct: 601 AIVTGIFVAISMTTGGGAWDNAKKYIEDGNHGGKGSEAHKAAVTGDTVGDPYKDTAGPAV 660

Query: 658 NPLIKIINIVALLLVPLLPA 677
           NPLIKIINIVALL+VPLLPA
Sbjct: 661 NPLIKIINIVALLIVPLLPA 680


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.140    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,395,264
Number of extensions: 55869
Number of successful extensions: 222
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 219
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1,221,021
Length adjustment: 90
Effective length of query: 590
Effective length of database: 888,291
Effective search space: 524091690
Effective search space used: 524091690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 133 (55.8 bits)