BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0970.p
         (344 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980255|ref|YP_001354269.1| tetraacyldisaccharide 4'-kinase...   372   e-104

>gi|152980255|ref|YP_001354269.1| tetraacyldisaccharide 4'-kinase
           [Janthinobacterium sp. Marseille]
          Length = 347

 Score =  372 bits (954), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/348 (57%), Positives = 240/348 (68%), Gaps = 5/348 (1%)

Query: 1   MAQSRPSAEAILSRAWQGRGPLACLLWPLSLLFGAVAALRRALFALGIKRAQRLPVPVIV 60
           MA  R + E  L++ W  RG  AC+L P+S +FG ++ALRRA + LG+ +++RLPVPV+V
Sbjct: 1   MALQRSNLEEFLTQTWAQRGLAACMLLPVSAVFGGLSALRRAAYRLGLSKSERLPVPVVV 60

Query: 61  VGNVFVGGTGKTPFAIWLIQALRAAGFHPGVISRGYGGGVEQTLVVHSGSAAAQVGDEPL 120
           VGN+FVGGTGKTP  IWL+  LR AG+ PGVISRGYG   +    V   S A +VGDEPL
Sbjct: 61  VGNIFVGGTGKTPLTIWLVHVLRQAGYTPGVISRGYGVHNDVPQAVTPQSLAQEVGDEPL 120

Query: 121 LIVQRTGVPLVVGRRRVQAGRALLAAHPEVDVIISDDGLQHYALARDIEIVLSDARGVGN 180
           LI  R   P++VGR RV    ALLAAHPEVDV++SDDGLQHY +ARD+EIVL D RG GN
Sbjct: 121 LIAYRAECPVMVGRDRVAVATALLAAHPEVDVLLSDDGLQHYRMARDVEIVLFDGRGAGN 180

Query: 181 GWLLPAGPLREPAWRRRDFSVLNVGVGQQGAAPAGVYAMQLQADYALQLAPPAARKPLAQ 240
           GWLLPAGPLREP  RRRDF+VLN      G  P  +  MQL    A +L   +    L+ 
Sbjct: 181 GWLLPAGPLREPVSRRRDFTVLNGAADAPGLPPDAIR-MQLVGMTAEKLNDRSQTSALSS 239

Query: 241 M----GEGGLRLAAVAGIGNPGRFFATLEGAGLQVSHHPLPDHYDFAIDPFAGLAADVIL 296
                G+    + A AGIGNPGRFF  L  AGLQ     LPDHYDFA +PFA + ADVIL
Sbjct: 240 FAASDGKHAPTILAAAGIGNPGRFFGLLRSAGLQFEEMALPDHYDFADNPFAHVKADVIL 299

Query: 297 ITEKDAVKCRAIEAIRNDPRIWVVPVTARIDSALAQHIVEKLRERPTA 344
           ITEKDAVKCR  E +RND R+WVVPVTA++D ALA+ IVEKLR R  A
Sbjct: 300 ITEKDAVKCRQNEGLRNDTRLWVVPVTAQLDGALAEKIVEKLRGRSIA 347


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.140    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 691,819
Number of extensions: 25836
Number of successful extensions: 90
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 260
Effective length of database: 910,473
Effective search space: 236722980
Effective search space used: 236722980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)