BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0956.p (432 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982790|ref|YP_001353557.1| major facilitator transporter [... 343 2e-95 gi|152980784|ref|YP_001354232.1| major facilitator superfamily o... 69 8e-13 gi|152982869|ref|YP_001355198.1| major facilitator superfamily o... 64 2e-11 gi|152982449|ref|YP_001355163.1| major facilitator superfamily o... 62 8e-11 gi|152982521|ref|YP_001354332.1| major facilitator superfamily o... 59 4e-10 >gi|152982790|ref|YP_001353557.1| major facilitator transporter [Janthinobacterium sp. Marseille] Length = 426 Score = 343 bits (879), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 198/417 (47%), Positives = 270/417 (64%), Gaps = 2/417 (0%) Query: 6 QSLANAVTPR-FHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISVVISV 64 QSL+N + R H++WV+V + FL +L S+ P V++ PL +EFGW+ IS ++V Sbjct: 4 QSLSNWLDRRGIHFSWVIVAITFLTMLTSSAALGLPGVLLQPLSKEFGWSNDQISSAVAV 63 Query: 65 NIALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWGLLVGAGT 124 L+G IGPF+A M+RFG+R+V+ ALVL+A+ ALST+M W M L WGLL+G GT Sbjct: 64 RYVLFGFIGPFAAIFMERFGLRKVITIALVLVAACLALSTMMTELWQMFLLWGLLLGTGT 123 Query: 125 GVAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVALLVSL 184 G+ A LGA + +RWFE RRGL +GLLTAS+ATGQ++FLP A ++ +YGWR + V L Sbjct: 124 GLTALVLGAVVANRWFEKRRGLVLGLLTASSATGQLIFLPFGAWLIQNYGWRMSVIPVFL 183 Query: 185 VAVLAIPLVWLLLPESPAAIGQKMVGQTSDIKDEGPDQSRRNPLSIALGALRTSVRMPDF 244 L +LL+ + P +G G + + + + LR++ R F Sbjct: 184 CCAAVAVLAFLLVRDRPHDVGAVAYGAAPGSEPPPLPATAQMTMMEPFRVLRSASRNRTF 243 Query: 245 WLLFMSFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLSDR 304 W+L +FF+CGLST+G I T F+++C DYG+ + +AS+LA MG D +GT LSGWLSDR Sbjct: 244 WVLAGTFFICGLSTSGLIQTHFVSLCGDYGMAAIPAASVLAMMGAFDFIGTILSGWLSDR 303 Query: 305 YNPRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVFGR 364 Y+ R LLFWYYGLRGL+LI+LP++ YGL++FA+FYGLDW ATVP TV+LA FG+ Sbjct: 304 YDNRKLLFWYYGLRGLSLIWLPHS-EFTLYGLSLFAMFYGLDWFATVPVTVKLAGAEFGK 362 Query: 365 LAAPIVFGWIVAGHQLGAATATTVAGYLRASLGNYTLSSIMMGVACLIGAVLVLRIK 421 A +VFGWI HQ+G A A AG R L YT + G+ACL AV+V IK Sbjct: 363 ERAGMVFGWIFTAHQIGGAFAAYGAGLSRTILMAYTPALYAAGIACLFAAVIVFMIK 419 >gi|152980784|ref|YP_001354232.1| major facilitator superfamily oxalate/formate antiporter [Janthinobacterium sp. Marseille] Length = 441 Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 79/358 (22%), Positives = 160/358 (44%), Gaps = 31/358 (8%) Query: 56 STISVVISVNIALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLS 115 + + V ++ I + PF + +FG R ++ +L A L+ W + S Sbjct: 53 TEVQVTFAILIVAQTFLSPFQGFLIDKFGPRMLLSAGAILTALSWVLAASATSVWGLYFS 112 Query: 116 WGLLVGAGTGVA-ANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYG 174 +GLL G GTG+ +G ++ +WF +RG A+G++ A G ++ +++ + S G Sbjct: 113 YGLLGGVGTGIIYVGVIG--LMVQWFPEKRGFAVGMVAAGYGFGAIMTTFAISSSIKSAG 170 Query: 175 WRSV----ALLVSLVAVLAIPLVWLLLPESPAAIGQKMVGQTSDIKDEGPDQSRRNPLSI 230 S L++ +V LA + P++ + + + SD E + + + Sbjct: 171 VSSTLMTFGLIIGVVGFLAAQ--GMRRPKADEVVELAVRHKASDANKESKYSYKSSEM-- 226 Query: 231 ALGALRTSVRMPDFWLLFMSFFVCGLSTNG-YIGTQFIAMCNDYGINE--VSSASILAAM 287 ++ P FWL+F+ + +ST+G + +Q A D+G+++ V + L Sbjct: 227 --------LKKPVFWLMFI--MMTMMSTSGLMVISQMGAFAKDFGVHDAMVFGMAALPLA 276 Query: 288 GMLDLVGTTLS----GWLSDRYNPRVLLFWYYGLRGLAL-IFLPYAFGLQYYGLTIFAIF 342 +D L+ GW+SDR +F +G+ G+A+ ++L + L +F Sbjct: 277 LTIDRFANGLTRPFFGWVSDRIGRENTMFIAFGMEGVAMTLWLMTTDNPVLFVLLSGVVF 336 Query: 343 YGLDWIATVPPTVRLANDVFGRLAAPIVFGWIVAGHQLGAATATTVAGYLRASLGNYT 400 +G I ++ P++ D FG A +G++ +G+ +A + + G++T Sbjct: 337 FGWGEIFSLFPSI--LTDTFGTKHATTNYGFLYMAQGVGSVLGGPLAAMMHEATGSWT 392 >gi|152982869|ref|YP_001355198.1| major facilitator superfamily oxalate/formate antiporter [Janthinobacterium sp. Marseille] Length = 430 Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/380 (21%), Positives = 161/380 (42%), Gaps = 41/380 (10%) Query: 1 MNKLTQ-SLANAVTPRFHYAW--VVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRST 57 MN+ T S V+ Y W +++G++ + ++ A ++ ++ + P+ + GW+R+ Sbjct: 1 MNQTTTLSATGTVSRSASYRWMQLILGIVAMAMI--ANLQYGWTLFVDPIAAKHGWSRAA 58 Query: 58 ISVVISVNIALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWG 117 I V ++ + + P + +FG R VVL +L G +++ + + Sbjct: 59 IQVAFTIFVLTETWLVPIEGWFVDKFGPRPVVLVGGILCGLGWFINSFADSLATLYFA-A 117 Query: 118 LLVGAGTGVAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRS 177 ++ G G G T + +WF RRGLA GL A G V + ++AM+ + G++ Sbjct: 118 VISGIGAGAVYGTCVGNAL-KWFPDRRGLAAGLTAAGFGAGSAVTIIPISAMIATRGYQD 176 Query: 178 VALLVSLVAVLAIPLVWLLLPESPAAIGQKMVGQTSDIK-DEGPDQSRRNPLSIALGALR 236 L + + + LV L L +P V K D P + R P+ Sbjct: 177 AFLYFGIGQGIIVVLVALFLTRAPEHKKGDAVANVQQTKRDYKPSEVLREPV-------- 228 Query: 237 TSVRMPDFWLLFMSFFVCGLSTNGYIGT-QFIAMCNDYGINEVSSASI----------LA 285 FW+++ F + ++ G + T Q ++ D+ + +V + + LA Sbjct: 229 -------FWIMYAMFVM--VAAGGLMATAQLGSIARDFKVFDVQVSMMGLTLPALTFALA 279 Query: 286 AMGMLDLVGTTLSGWLSDRYNPRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFA--IFY 343 +L+ + GW+SD+ +F + + + ++ L + +G + I +F+ Sbjct: 280 IDRVLNGLTRPFFGWVSDQIGREPTMFIAFAIEAVGILAL-FHYGHNPFAFVILTGIVFF 338 Query: 344 GLDWIATVPPTVRLANDVFG 363 I ++ P+ D FG Sbjct: 339 AWGEIYSLFPST--CADTFG 356 >gi|152982449|ref|YP_001355163.1| major facilitator superfamily oxalate/formate antiporter [Janthinobacterium sp. Marseille] Length = 441 Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 102/434 (23%), Positives = 179/434 (41%), Gaps = 57/434 (13%) Query: 1 MNKLTQSL---ANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRST 57 M TQ L A+ + + +VVGV+ ++ +A I+ ++ + ++ FGW R+ Sbjct: 1 MTTATQQLSGGASGTSNATRWLQLVVGVV--CMIATANIQYAWTLFVPEIQGTFGWARAE 58 Query: 58 ISVVISVNIALYGLIGPFSAAAMQRFGIRRVV-LGALVLLASGTALSTLMHMPWHMLLSW 116 I + ++ + + + P + + G R +V GA+ + + W++ Sbjct: 59 IQIAFTIFVLVQTWLAPIEGYFIDKLGPRLMVAFGAI-----------FIGLAWYINSQA 107 Query: 117 GLLVG-----AGTGVAANTLGATIVS---RWFETRRGLAMGLLTASAATGQMVFLPLMAA 168 L+G A GV ++ AT ++ +WF RRGLA+GL G + +AA Sbjct: 108 STLMGFYVGAALGGVGVGSIYATCINNALKWFPDRRGLAVGLTAGGYGAGSAATILPIAA 167 Query: 169 MVGSYGWRSVALLVSLV-AVLAIPLVWLLLPESPAAIGQKMVGQTSDIKDEGPDQSRRNP 227 M+ S G++ L ++ LA W L SPA + V ++ + D + + Sbjct: 168 MIESSGFQETFLFFGILQGSLAFVAAWFL--RSPA---KGEVKASAKLVQATRDYTLKEA 222 Query: 228 LSIALGALRTSVRMPDFWLLFMSFFVCGLSTNGYIGTQFIAMCNDYGINEVS---SASIL 284 L+ L FWL+F F+C ++ Q + D G+ E ++ Sbjct: 223 LNTKL-----------FWLMFF-MFICVVTGGMMAVAQLGVIAQDLGVKEFEVDLHFFVM 270 Query: 285 AAMG---MLDLVGTTLS----GWLSDRYNPRVLLFWYYGLRGLALIFLPYAFGLQYYGLT 337 AA+ MLD + +S GW+SD + + L G +I L Y FG + Sbjct: 271 AALPLALMLDRIMNGISRPLFGWISDNIGREKTMVIAFTLEGFGIIALGY-FGHNPWAFL 329 Query: 338 IFAIFYGLDWIATVPPTVRLANDVFGRLAAPIVFGWIVAGHQLGAATATTVAGYLRASLG 397 I + L W LA D FG ++G + +G A V + + G Sbjct: 330 ILSGVVFLAWGEVYSLFSALAGDAFGTKHIGKIYGVLYTAKGIG-ALFVPVGNLMMEATG 388 Query: 398 NYTLSSIMMGVACL 411 T S+++ VAC+ Sbjct: 389 --TWSTVLYTVACM 400 >gi|152982521|ref|YP_001354332.1| major facilitator superfamily oxalate/formate antiporter [Janthinobacterium sp. Marseille] Length = 434 Score = 59.3 bits (142), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 90/378 (23%), Positives = 160/378 (42%), Gaps = 39/378 (10%) Query: 1 MNKLTQSLANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISV 60 +N +L + + W+ + + L + A ++ ++ + P+E + W ++I + Sbjct: 9 LNSPADTLDSDQVKGYKNRWMQLVIGILCMGLVANLQYGWTLFVEPMESKHHWGTASIQL 68 Query: 61 VISVNIALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWGLLV 120 S+ I + + P +FG R VV G + G +++ ML + ++ Sbjct: 69 AFSIFIVIETWLVPIEGWLGDKFGPRPVVAGGAIFAGLGWIMNSYAD-SLTMLYAAAVVS 127 Query: 121 GAGTGVAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAL 180 G G G T + +WF RRGLA GL A G V + +A M+GS G+ L Sbjct: 128 GIGAGCVYGTCVGNAL-KWFPDRRGLAAGLTAAGFGAGAAVTVIPIANMIGSAGYEKTFL 186 Query: 181 LVSLVAVLAIPLVWLLL--PESPAAIGQKMVGQTSDIKDEGPDQSRRNPLSIALGALRTS 238 ++ +AI ++ LLL P++P Q V S + D + R L+ Sbjct: 187 TFGIIQGVAIFILALLLVRPQAPKH-AQSKVANVSKV-----DYTTRQMLT--------- 231 Query: 239 VRMPDFWLLFMSFFVCGLSTNGYIGT-QFIAMCNDYGINEVSSASILAAMGMLDLV---- 293 P FWL+++ + + ++ G + T Q + +D+GI+ + +L L Sbjct: 232 --KPVFWLIYVIYVL--VAAGGVMATAQLGPIAHDFGISSTPMTMFGVTLPLLTLALSID 287 Query: 294 ----GTT--LSGWLSDRYNPRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDW 347 G T L G++SD+ +F + GLAL+ L +G Y FA + W Sbjct: 288 NVANGLTRPLCGFISDKIGRENTMFLVFIGEGLALLGL-MQYGHNPYLFITFAALIFMFW 346 Query: 348 --IATVPPTVRLANDVFG 363 I ++ P + D FG Sbjct: 347 GEIFSIFPAI--CGDTFG 362 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.327 0.139 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 919,491 Number of extensions: 36020 Number of successful extensions: 251 Number of sequences better than 1.0e-08: 8 Number of HSP's gapped: 244 Number of HSP's successfully gapped: 8 Length of query: 432 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 346 Effective length of database: 903,079 Effective search space: 312465334 Effective search space used: 312465334 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 131 (55.1 bits)