BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0948.p
         (727 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980274|ref|YP_001355313.1| FecA iron(III) dicitrate transp...    83   7e-17

>gi|152980274|ref|YP_001355313.1| FecA iron(III) dicitrate transport
           protein [Janthinobacterium sp. Marseille]
          Length = 707

 Score = 82.8 bits (203), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 179/730 (24%), Positives = 291/730 (39%), Gaps = 99/730 (13%)

Query: 2   KHLCLKPSVQQVMHALTIMFLAAPLVVQAQQATDLGAVSATGTADQADSGQRLRAAEAVY 61
           K + L+        +L +M ++   +V AQQAT  G   AT  A Q  SG  L       
Sbjct: 8   KSVSLRKLKCSAAVSLAVMVMSG--MVHAQQATTTGDEPATLEAIQV-SGDLLGTGLQNS 64

Query: 62  KKAPAEGSLEARSAQSEVSDEFIRNYVSPVADYSQVLLMTPGMYSVSPNGVGLGDT---K 118
            K  A        A++ V  E I N  S  A  S V+   PG+  VS N    G      
Sbjct: 65  VKRYA-------GARTVVKKEEIEN--SGAASISDVMRRIPGV-QVSDNSGSAGSAISLN 114

Query: 119 TSFRGFSDGDY----TMTFDGIPFSDTNSSSHHSWAFFPSQFLGGTVVDRSPGSAAT-VG 173
              RG + G Y    T+  DGIP ++         +F P        VD   G  A   G
Sbjct: 115 VGVRGLA-GRYSPRSTILLDGIPMANA-PYGQPQLSFAPVSLNNVESVDVVRGGGAVRYG 172

Query: 174 QANFGGSVNLLSRVMQPEQRSSVFGSYGSFNTRIY-----GAEFETGQFGIDGAHNLL-- 226
             N GG +N  +R +      +  G+ G  + R       G+  +   F  +   N L  
Sbjct: 173 PQNVGGIINFKTRSI-----PTTPGATGDVSIRQNDYSKGGSNTQYSAFAGNQLENGLGF 227

Query: 227 -INAHEMKSDGYQSYNKQARDAISLKYQFAISDNTALTLFASYIDLKTNTPNTKGATRAQ 285
            +    M    ++  + +  + ++LK+++ +S  + +    SY D+ + TP   G T   
Sbjct: 228 AVLYSGMSGSDWRVGSDEKVNDLALKFRYELSPTSEIYGKFSYYDVTSRTPG--GLT--- 282

Query: 286 IAQFGDDYLLSGNPKDPNYFGYNFYHVTSDFDYLGLSSNLGGGWKLDDKVYTYAYHNQQN 345
           +AQ+  D   +  P D  Y+  +     + FD +G  + +    + + + Y Y   N+Q+
Sbjct: 283 VAQYNADPFQNTRPTD--YWSGD----RTAFD-IGYINTISDTQEFEIRTY-YNESNRQS 334

Query: 346 YNGSTISATSATDKLNAYRAYGNL-------LRLNHESSLGTLRSGLWLEVSNSDRHQYP 398
              +    T+A    +  R+Y  L        R N  ++   +  G        D + Y 
Sbjct: 335 TLYTVNRTTNAVSIQHQPRSYQTLGIEPRYTQRFNIGNTTNDVTVGYRYIRERGDDNVYS 394

Query: 399 SSPLTWIDTALPNFRESYTSTILQPFVEYEFKVTPELKVTPGIKY---SSYRQDLTQFAD 455
            S  T    A   F  S  +  +    +  F      ++TPG+++   +S R D T  AD
Sbjct: 395 ESVTTGALGAQTTFDNSTDAHSIYIDDKIAFGA---WRITPGVRFEHINSLRHDRTTGAD 451

Query: 456 NGKTVGNLGGRPFVKNAATYNTYLPSLDAHYMLRPNWSVYAQFAAGDEIPPTSVFDTKNA 515
                        VKN    N  LPSL+  Y+L  + +++A +     +   +  +T   
Sbjct: 452 FE-----------VKN----NKPLPSLNVAYLLTQDITLFANYGTSFGVVQNTQLNTMTP 496

Query: 516 SVSALPASIKSKTWQTGSVWKDEHLTVDVDAYRIKFDNAYSSFTDNNGFTSYFANGSSTT 575
                P    +KT + G+ WK + ++ ++ A+ I+FDN   S        ++F  G +  
Sbjct: 497 GNPLKPE--LAKTVEAGARWKSKQVSAEITAFNIRFDNQIQSVGSGANL-AFFNLGKTEH 553

Query: 576 QGIEAESTLLLG-----SGFSLYLNATYGSAKYQSGKW----VAGAPGDTEAVGLNYGQG 626
           +GIE             SGF+ + N TY  A  +SG +    V     +T+ VG+ Y  G
Sbjct: 554 KGIETAVDYTFDKAGPMSGFNAFANYTYTRATLESGAFAGNDVPFYSRNTDTVGMRYETG 613

Query: 627 PWGISWLNKRVGSTYGDNGN-VHEAVR-----ISPFMLSNLFANYTIKNPGAMIKQAKLQ 680
           PWG +  +    S + D  N V E+V      I  F L N   N+  K+P    K  ++ 
Sbjct: 614 PWGFNLSSTHQSSQFADERNTVAESVNGENGLIPGFRLWNAQVNW--KSPNK--KGLEIL 669

Query: 681 FGVNNLFDKH 690
            G+NNL DK 
Sbjct: 670 AGLNNLTDKR 679


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.315    0.131    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,786,082
Number of extensions: 78569
Number of successful extensions: 190
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 189
Number of HSP's successfully gapped: 1
Length of query: 727
Length of database: 1,221,021
Length adjustment: 90
Effective length of query: 637
Effective length of database: 888,291
Effective search space: 565841367
Effective search space used: 565841367
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 133 (55.8 bits)