BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0925.p (458 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transami... 204 6e-54 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 187 1e-48 gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 124 2e-29 gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 117 2e-27 gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate... 84 2e-17 >gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transaminase [Janthinobacterium sp. Marseille] Length = 439 Score = 204 bits (520), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 144/454 (31%), Positives = 216/454 (47%), Gaps = 41/454 (9%) Query: 9 LDRSHLIHPVASFREHEELGPIILKSGHGAYLTDQQDKQLLDAFSGLWCVNTGYGQESVI 68 LD SHL P + R+ + P +L + G Y T +Q+LD +GLWCVN G+G + Sbjct: 5 LDTSHLWMPFTANRQFKA-KPRMLVAASGMYYTSDDGRQILDGTAGLWCVNAGHGHPKIT 63 Query: 69 RAATEQMQRLPYATGYFHFASEPAILLAKKLVDISPASLQHVYFTLGGSDAVDAAIRYIT 128 A +Q + YA F A A L +I+PA L V+F GS+ VD A++ Sbjct: 64 EAIQKQAASMDYAP-LFQIGHPLAFEAATALAEIAPAGLNRVFFCNDGSEGVDTALKIAL 122 Query: 129 HYHNSIGKPTKKNFISLQRGYHG--------------SSSVGAGLTALPNFHFHFDLPLP 174 YH G + I +R YHG G GL A H L + Sbjct: 123 AYHRIRGDAGRTRLIGRERAYHGVGFGGIAVGGIAGNRKQFGPGLAA---DHLRHPLDIA 179 Query: 175 TQHYLPSPYPYRSELQDDAAIIAASVQALREKVAEL-GADNVAAFFCEPIQGSGGVVVPP 233 Y + +E+ D+ L +++ L VAA EP+QGS GV++PP Sbjct: 180 KNAYSRGLPLHGAEMADE----------LEQRLLALHDPSTVAAVIVEPLQGSTGVILPP 229 Query: 234 KGWLKAMQLACNELDILFVVDEVITGFGRTGPMFACLDEDVQPDLMTMAKGLTAGYAPMG 293 KG+L+ +++ C++ +L + DEVITGFGR G F V+PD++ AK LT PMG Sbjct: 230 KGYLEKLRVICDKHGVLLIFDEVITGFGRLGTAFGADFFGVKPDMIVCAKALTNAAVPMG 289 Query: 294 AVMMSDRVYQGIADGAPMSTV-VGHGQTYSAHPVSAAVALEVLRLYEEGGLLENGRRLEP 352 AV++ +++++ AP ++ + HG TYS HP++AA A+ L +Y E L + + P Sbjct: 290 AVIVHEKIHETFMQMAPADSIELFHGYTYSGHPLAAAAAIATLDVYREEQLFQRAAGMAP 349 Query: 353 VFAGGLRALLDHPLVGDARSRGLLGALEL--VADKTTKARFAPELKLHERIFQVAYRHGL 410 F +L P V D R+ GL+ +EL +A K P + +E + + GL Sbjct: 350 YFEDAAHSLKGLPFVKDVRNLGLVAGVELEGIAGK-------PGARAYELFTKAFWDKGL 402 Query: 411 IFRAFGDNILGFAPALCYTEQDFALMFARLRAIL 444 + R D IL +P L + MF + IL Sbjct: 403 LTRVTAD-ILALSPPLIINKAQVDEMFGSITDIL 435 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 187 bits (474), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 122/448 (27%), Positives = 205/448 (45%), Gaps = 13/448 (2%) Query: 4 SSLAALDRSHLIHPVASFREHEELGPIILKSGHGAYLTDQQDKQLLDAFSGLWCVNTGYG 63 S L A + HP + HE L I + G GA+L D ++ LDA S W G+ Sbjct: 11 SDLVARSLRSVWHPCTQMQHHETLPLIPVSHGRGAWLYDTDGQRYLDAISSWWVNMFGHA 70 Query: 64 QESVIRAATEQMQRLPYA--TGYFHFASEPAILLAKKLVDISPASLQHVYFTLGGSDAVD 121 + A Q+ L +A G+ H EP + L+++L + L H ++ G+ AV+ Sbjct: 71 NPRINSALRSQLDMLEHAMLAGFTH---EPVVQLSEQLAARTNHELGHCFYASDGASAVE 127 Query: 122 AAIRYITHYHNSIGKPTKKNFISLQRGYHGSSSVGAGLTALPNFHFHFDLPLPTQHYLPS 181 A++ H + G K+ F+ L+ YHG + +T +P F +D L H + S Sbjct: 128 IALKMSFHSWRNNGLSDKREFVCLKGSYHGETIGALAVTDVPIFRDAYDAMLQHAHVVMS 187 Query: 182 PYPYRSELQDDAAIIAASVQALREKVAELGADNVAAFFCEP-IQGSGGVVVPPKGWLKAM 240 P + + AA +A + E + + + ++AA EP +Q + G+ + +L+ + Sbjct: 188 PDARAARDGETAADVARRAASALETLLQERSKHIAALIVEPLVQCATGMAMYDPVYLQEV 247 Query: 241 QLACNELDILFVVDEVITGFGRTGPMFACLDEDVQPDLMTMAKGLTAGYAPMGAVMMSDR 300 + C++ + + DE+ G GRTG FAC V PD + ++KG++ GY P+ VM D Sbjct: 248 RALCDKYQVHLIADEIAVGCGRTGTFFACEQAAVWPDFLCLSKGISGGYLPLSLVMTRDE 307 Query: 301 VYQGIADGAPMSTVVGHGQTYSAHPVSAAVALEVLRLYEEGGLLENGRRLEPVFAGGLRA 360 +YQ G + H +Y+ +P++ AL L ++EE ++ R L Sbjct: 308 IYQSFYHGDVTRGFL-HSHSYTGNPLACRAALATLAIFEEDDVINANRLRAARLTEALAP 366 Query: 361 LLDHPLVGDARSRGLLGALELVADKTTKARFAPELKLHERIFQVAYRHGLIFRAFGDNIL 420 L HP V + R RG++ A + V D A R F A H L+ R G + Sbjct: 367 LAAHPQVSNFRQRGMIWAFDAVIDNAEAAS-----TFSRRFFTTALEHELLLRPIGPTVY 421 Query: 421 GFAPALCYTEQDFALMFARLRAILDEVL 448 P + E+ L AR + + ++V+ Sbjct: 422 LMPPYILNNEEIDGLA-ARTQTVFEKVM 448 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 124 bits (310), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 111/409 (27%), Positives = 185/409 (45%), Gaps = 52/409 (12%) Query: 29 PIILKSGHGAYLTDQQDKQLLDAFSGLWCVNTGYGQESVIRAATEQMQRLPYATGYFHFA 88 P++L G G +L D+ K+ +D S V+ G+ +++A T+Q +L + F+ Sbjct: 26 PVVLSKGRGIWLWDEDGKRYMDMMSAYSAVSFGHSHPQLVQALTQQAGQLAVTSRAFYTD 85 Query: 89 SEPAILLAKKLVDISPASLQHVYFTLGGSDAVDAAIRYITHYHNSI-GKPTKKNFISLQR 147 L + L +++ + G++AV+ +++ + + G P ++ I + Sbjct: 86 QLGRFL--QLLCEMT--GMDKALPMNSGTEAVETSLKAARKWAYKVKGVPDQQAQIIVCA 141 Query: 148 G-YHGSSSVGAGLTALPNFHFHFDLPLPTQHYLPSPYPYRSELQDDAAIIAASVQALREK 206 G + G S+ G ++ + F P ++ PY DAA + A++ Sbjct: 142 GNFAGRSTTIVGFSSEAQYREGFG-PF-DGGFVTIPY-------GDAAALEAAI------ 186 Query: 207 VAELGADNVAAFFCEPIQGSGGVVVPPKGWLKAMQLACNELDILFVVDEVITGFGRTGPM 266 + AAF EPIQG GG++VPP +L + C +IL + DEV TG GRTG + Sbjct: 187 -----TPHTAAFLVEPIQGEGGIIVPPDAYLAQCREICTRRNILLICDEVQTGLGRTGRL 241 Query: 267 FACLDEDVQPDLMTMAKGLTAGYAPMGAVMMSDRVYQGIADGAPMSTVVGHGQTYSAHPV 326 AC E ++PD + + K L G P+ A + V G HG T+ +P+ Sbjct: 242 LACDHEGIRPDGLILGKALGGGLLPVSAFLARSEVMDVFTPG-------DHGSTFGGNPL 294 Query: 327 SAAVALEVLRLYEEGGLL----ENGRRLEPVFAGGLRALLDHPLVGDARSRGLLGALELV 382 +AAV L L +G L+ + G+RL GL A L HP + R +GLL LEL Sbjct: 295 AAAVGYAALSLLRDGELIAAAEQRGQRLRE----GLNA-LRHPAIRSVRGKGLLIGLELE 349 Query: 383 ADKTTKARFAPELKLHERIFQVAYRHGLIFRAFGDNILGFAPALCYTEQ 431 T F ER+ + +G++ + ++ FAP L T + Sbjct: 350 PQVITARSFC------ERLME----NGVLSKETHHTVVRFAPPLIITAE 388 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 119/445 (26%), Positives = 196/445 (44%), Gaps = 65/445 (14%) Query: 16 HPVASFREHEELGPIILKSGHGAYLTDQQDKQLLDAFSGLWCVNT-GYGQESVIRAATEQ 74 +PV S ++ G G +LTD + K+ LD G W VN G+ + + A Q Sbjct: 6 YPVNSLLYITNRPELVFTEGDGMWLTDHKGKRYLDYLQG-WAVNCLGHSPQCIQDALNVQ 64 Query: 75 MQRLPYATGYFHFASEPAILLAKKLVDISPASLQHVYFTLGGSDAVDAAIRYITHY---- 130 ++L + F+ +EP+I LA L S V+F G++A ++A++ + Sbjct: 65 AKKLINPSPAFY--NEPSIALAALLTGNS--CFDRVFFANSGAEANESAVKLARKWGKLN 120 Query: 131 HNSIGKPTKKNFISLQRGYHG------SSSVGAGLTALPNFHFHFDLPLPTQHYLPS-PY 183 N+ G+ + I+ +HG S+S AG + Y P P Sbjct: 121 KNAAGE-NRYEIITFDHSFHGRTLATMSASGKAGWDTI---------------YAPQVPG 164 Query: 184 PYRSELQDDAAIIAASVQALREKVAELGADNVAAFFCEPIQGSGGVVVPPKGWLKAMQLA 243 +++ L D + V +L D A EP+QG GGV+ + +++A++ Sbjct: 165 FFKATLND------------IDSVKKLITDKTIAVMLEPVQGEGGVIPATREFMQALRAL 212 Query: 244 CNELDILFVVDEVITGFGRTGPMFACLDEDVQPDLMTMAKGLTAGYAPMGAVMMSDRVYQ 303 E +L +VDEV TG GRTG +F + PD+MT+ KG+ G P+ A++ + Sbjct: 213 TKEHGVLLIVDEVQTGMGRTGELFGYQLSGITPDIMTLGKGIGGG-VPLAAMLCREE--- 268 Query: 304 GIADGAPMSTVVGHGQTYSAHPVSAAVALEVLRLYEEGGLLENGRRLEPVFAGGLRALLD 363 IA P G TY+ +P+ AV V + G L++ + + L L + Sbjct: 269 -IACFEPGD----QGGTYNGNPLMTAVGNAVAQALLAPGFLQSVKDKGAYLSAALLKLTE 323 Query: 364 -HPLVGDARSRGLLGALELVADKTTKARFAPELKLHERIFQVAYRHGLIFRAFGDNILGF 422 H L G+ R GLL AL+L +D P++ R + GL+ + ++L F Sbjct: 324 KHGLAGE-RGDGLLRALKLGSD------IGPQIVEKARDLEPV---GLLLNSPRPDLLRF 373 Query: 423 APALCYTEQDFALMFARLRAILDEV 447 PAL T ++ M L +L E+ Sbjct: 374 MPALNVTYEELDQMIEMLSGVLSEL 398 >gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate aminotransferase [Janthinobacterium sp. Marseille] Length = 431 Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 29/280 (10%) Query: 29 PIILKSGHGAYLTDQQDKQLLDAFSGLWCVNTGYGQESVIRAATEQMQR------LPYAT 82 P + A LTD+ + +D +G +N G+ ++ +A + + L AT Sbjct: 19 PTVFAKAQNAVLTDEGGRSYIDFLAGAGTLNYGHNNPTMKQAVIDYLSEDGIVHGLDMAT 78 Query: 83 G---YFHFASEPAILLAKKLVDISPASLQHVYFT-LGGSDAVDAAIRYITHYHNSIGKPT 138 F E +LL +K+ + FT G++AV+AAI+ N G+ Sbjct: 79 SAKKTFLQTFESHVLLPRKM-------QYKIQFTGPTGTNAVEAAIKL---ARNVTGR-- 126 Query: 139 KKNFISLQRGYHGSSSVGAGLTALPNFHFHFDLPLPTQHYLPSPYPYRSELQDDAAIIAA 198 + IS G+HG S LT F + L H PY + IA Sbjct: 127 -QMVISFTNGFHGVSLGSLALTGNRKFRDAAGVSLNDVHR----APYSGYFGMNIDTIAM 181 Query: 199 SVQALREKVAELGADNVAAFFCEPIQGSGGVVVPPKGWLKAMQLACNELDILFVVDEVIT 258 + + + + G D AA E +QG GG+ V WLK ++ C +IL +VD++ Sbjct: 182 LDKLIVDPSS--GVDLPAAIIVECVQGEGGLNVAGLNWLKKLEQLCQRHEILLIVDDIQA 239 Query: 259 GFGRTGPMFACLDEDVQPDLMTMAKGLTAGYAPMGAVMMS 298 G GRTG F+ ++PD++T++K L+ PM ++M Sbjct: 240 GCGRTGTFFSFEPAGIKPDIITLSKSLSGFGLPMAVLLMK 279 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.322 0.138 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,134,929 Number of extensions: 50439 Number of successful extensions: 134 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 125 Number of HSP's successfully gapped: 6 Length of query: 458 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 372 Effective length of database: 903,079 Effective search space: 335945388 Effective search space used: 335945388 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 131 (55.1 bits)