BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0921.p
         (215 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981689|ref|YP_001354958.1| stringent starvation protein A ...    67   1e-12
gi|152981765|ref|YP_001353366.1| glutathione S-transferase [Jant...    54   6e-09
gi|152980765|ref|YP_001354317.1| glutathione S-transferase [Jant...    54   7e-09

>gi|152981689|ref|YP_001354958.1| stringent starvation protein A
           [Janthinobacterium sp. Marseille]
          Length = 203

 Score = 66.6 bits (161), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 18/187 (9%)

Query: 1   MTTLYSYFRSSASYRVRIALNLKGVAYETAAVHLLNQGGEQLLPAFTQVNPHALVPVLAD 60
           M  LYS      S R R+ L  KG+ +E   V L N+  +      + +NP+  VP+L +
Sbjct: 1   MMVLYSGTTCPFSQRCRLVLFEKGMDFEVRDVDLFNKPED-----ISTMNPYGQVPILVE 55

Query: 61  QGRLLTQSMAMLEYLEERYPTPALLPGDAFQRAHIRELALAIACE--IHPLNNLRVLRYL 118
           +  +L +S  + EY++ER+P P L+P D   RA  R +      E  IH           
Sbjct: 56  RDLILYESNIINEYIDERFPHPQLMPADPLMRARARLMLFNFEKELFIH----------- 104

Query: 119 KHQLAVDEAQKTAWIQHWIKLGFSALEQQLAADTTRGHFCVGDAPTMADCFLVPQIFNAR 178
            H L  D+ +    IQ   +         LA    +  + +GD  +M D  + P ++   
Sbjct: 105 VHTLENDKGRSGEKIQEKARNEIRDRLTTLAPLFLKNKYMLGDEFSMLDVAIAPLLWRLD 164

Query: 179 RFEVDMA 185
            + ++++
Sbjct: 165 HYGIELS 171


>gi|152981765|ref|YP_001353366.1| glutathione S-transferase
           [Janthinobacterium sp. Marseille]
          Length = 209

 Score = 54.3 bits (129), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 11/206 (5%)

Query: 1   MTTLYSYFRSSASYRVRIALNLKGVAYETAAVHLLNQGGEQLLPAFTQVNPHALVPVLAD 60
           M  LY+Y  S   Y++R+ +N+  V YET A+     G E     F ++NP   +PVL D
Sbjct: 1   MIKLYNYELSGNCYKLRLLMNILNVPYETVAIDFY-PGREHKSKGFLEINPFGQLPVLED 59

Query: 61  QGRLLTQSMAMLEYLEERYPTP-ALLPGDAFQRAHIRELALAIACEI-HPLNNLRVLRYL 118
               L  + A+L YL  +Y       P D      I  + L++A +I    +  R+   L
Sbjct: 60  GELRLRDAQAILVYLAAKYDAERKWYPNDPAAMGKI-AMWLSVADDITRTASAARLHDAL 118

Query: 119 KHQLAVDEAQKTAWIQHWIKLGFSALEQQLAADTTRG-HFCVGDAPTMADCFLVPQIFNA 177
            + + +++ +  A   H +   F  +++ LA     G  +   D PT+AD    P I  +
Sbjct: 119 GYVMDIEKTRADA---HAL---FRIIDEHLADMEVIGQQWLALDRPTIADIACFPYIAMS 172

Query: 178 RRFEVDMAPYPTLCAIDAACNALPAF 203
              ++    YP +         LP F
Sbjct: 173 HEGDIMRDDYPAIRRWIERVRRLPGF 198


>gi|152980765|ref|YP_001354317.1| glutathione S-transferase
           [Janthinobacterium sp. Marseille]
          Length = 208

 Score = 53.9 bits (128), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 15/217 (6%)

Query: 1   MTTLYSYFRSSASYRVRIALNLKGVAYETAAVHLLNQGGEQLLPAFTQVNPHALVPVLAD 60
           +  LY    S   +RV++ L+L GV YE    +   +   +    F ++NP   +PVL D
Sbjct: 5   LIKLYGVPLSGHCHRVKLFLHLLGVKYEQIDANADVRATAE----FRKLNPLGQIPVLID 60

Query: 61  QGRLLTQSMAMLEYLEERYPTPA-LLPGDAFQRAHI-RELALAIACEIHPLNNLRVLRYL 118
               ++ S A+L YL +RY   +  LP DA   A + R L++A     +   N R+  Y 
Sbjct: 61  GDLAISDSNAILVYLAKRYAADSTWLPQDAMGAAQVQRWLSIAAGELRYGPANARI--YA 118

Query: 119 KHQLAVDEAQKTAWIQHWIKLGFSALEQQLAADTTRGHFCVGDAPTMADCFLVPQIFNAR 178
             ++  D+  + A I   + LGF  + Q LA+      +   + PT+AD      + +A 
Sbjct: 119 LWKMGKDDPVRAAEIGRDL-LGF--MNQHLASRD----YLASEYPTIADLACHSYVAHAP 171

Query: 179 RFEVDMAPYPTLCAIDAACNALPAFQQAHPAQQPDAA 215
              + +  YP + A  A    LPAF     +  P+AA
Sbjct: 172 EGGIPLDEYPAVRAWLARIEKLPAFVAMPRSAIPEAA 208


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 471,885
Number of extensions: 18551
Number of successful extensions: 79
Number of sequences better than 1.0e-08: 4
Number of HSP's gapped: 76
Number of HSP's successfully gapped: 4
Length of query: 215
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 136
Effective length of database: 928,958
Effective search space: 126338288
Effective search space used: 126338288
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 127 (53.5 bits)