BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0916.p
         (277 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982769|ref|YP_001354011.1| hypothetical protein mma_2321 [...   250   9e-68
gi|152982503|ref|YP_001354773.1| hypothetical protein mma_3083 [...   131   4e-32

>gi|152982769|ref|YP_001354011.1| hypothetical protein mma_2321
           [Janthinobacterium sp. Marseille]
          Length = 286

 Score =  250 bits (638), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 129/282 (45%), Positives = 172/282 (60%), Gaps = 7/282 (2%)

Query: 1   MNIYRDYDRQALDRQYNVRLGISDFQAYFDRFASEGQAARQAHPHLADVPYGEDALQTLD 60
           M++YR++++  LD+QYNVR GI DF   F R++    A R A+  L ++PYG +  Q LD
Sbjct: 1   MSVYRNFNQVELDKQYNVRGGIPDFLDIFSRWSQSSAAFRSANRVLENIPYGINETQNLD 60

Query: 61  FFPGRSNGRPLLVFIHGGYWRSLDKHQFSQVALPYLAQDINVALINYRLAPQVRMGDIAA 120
           FFP  + GRPLLVFIHGGYW+SLDK  FS +A PY+ +DINVA++NYRLAP V M +I A
Sbjct: 61  FFPATTAGRPLLVFIHGGYWQSLDKSDFSYLAAPYIKRDINVAVVNYRLAPTVGMDEIVA 120

Query: 121 DCGRALRLLYAKAAALRFDPDAIWLMGHSAGAHLAALIAS-------LGAAPVRGLCGIS 173
           D   AL  LY  A  L FD D I+L GHSAG HL A + S       L A  ++G C IS
Sbjct: 121 DNRDALIWLYRNAETLAFDKDKIFLSGHSAGGHLTATMVSIDWTAHGLPANVLKGACAIS 180

Query: 174 GIYDLEPVRLSYLNEVLHLSPSDALQASPQLLALPNGVQALLCAGGQESAEFQRQRDLYA 233
           G+YDLEP+RL YLN+ + L+P+   Q SP           +L  GG ES E+ R +  YA
Sbjct: 181 GLYDLEPIRLCYLNKAVGLTPAQVEQFSPTKKLPVVKTPLILTVGGNESDEYHRLQAEYA 240

Query: 234 ATLRQSGHAVEVVSLPQAHHLDVVDVAADAHSVLTRTMVKMM 275
             L   G  +++V     HH D VD   D  + L + M++++
Sbjct: 241 ELLGAKGMEIQIVRQADGHHFDAVDRLGDEENELGKAMLQLI 282


>gi|152982503|ref|YP_001354773.1| hypothetical protein mma_3083
           [Janthinobacterium sp. Marseille]
          Length = 273

 Score =  131 bits (330), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 130/273 (47%), Gaps = 6/273 (2%)

Query: 2   NIYRDYDRQALDRQYNVRLGISDFQAYFDRFASEGQAARQAHPHLADVPYGEDALQTLDF 61
           +IY   D+ ALD  YN  L + D       F     A R  +    D+ YG      +D+
Sbjct: 3   SIYHGMDQAALDAGYNNSLAVKDSPTILKDFDQRSAALRVVYGQRLDLRYGPAERNRIDY 62

Query: 62  FPGRSNGRPLLVFIHGGYWRSLDKHQFSQVALPYLAQDINVALINYRLAPQVRMGDIAAD 121
           F G   G PLLVFIHGGYW+   K  FS +A   LA  ++VALI Y LAP   + +I A+
Sbjct: 63  FAGSKPG-PLLVFIHGGYWQMRAKETFSFLAAGPLAHGMHVALIGYTLAPDATLTEIVAE 121

Query: 122 CGRALRLLYAKAAALRFDPDAIWLMGHSAGAHLAALIASLGAAPVRGLCGISGIYDLEPV 181
               +  L   A     D + I + G SAG HL A+        V G   ISGIYDLEP+
Sbjct: 122 VRAGIAWLRQHAGEFGADVERIVVSGWSAGGHLTAMCVD--EPGVIGGVAISGIYDLEPI 179

Query: 182 RLSYLNEVLHLSPSDALQASPQLLALPNGVQALLCAGGQESAEFQRQRDLYAATLRQSGH 241
           RL YLN  L LS ++  +    LL   +     L  G  E  E QRQ + + A   ++  
Sbjct: 180 RLCYLNNKLQLSEAEE-KGLSPLLLPLSPRPLTLMYGSDELPELQRQSEQFGAA--RNAL 236

Query: 242 AVEVVSLPQAHHLDVVDVAADAHSVLTRTMVKM 274
              +V LPQ +H  +++  A     +TR +  +
Sbjct: 237 PGTLVPLPQRNHFTILNELATPDGAITREVCAI 269


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 554,733
Number of extensions: 20584
Number of successful extensions: 80
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 76
Number of HSP's successfully gapped: 2
Length of query: 277
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 195
Effective length of database: 917,867
Effective search space: 178984065
Effective search space used: 178984065
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 129 (54.3 bits)