BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0915.p
         (851 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980682|ref|YP_001355307.1| oxidoreductase [Janthinobacteri...   350   1e-97
gi|152980545|ref|YP_001355312.1| iron-regulated membrane protein...   111   2e-25

>gi|152980682|ref|YP_001355307.1| oxidoreductase [Janthinobacterium
           sp. Marseille]
          Length = 456

 Score =  350 bits (899), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 209/462 (45%), Positives = 262/462 (56%), Gaps = 60/462 (12%)

Query: 392 PVLVVHASQTGQAERIALHTAAGLRRSGLSVSLQALAQTTLESLRHHRRILFIASTFGDG 451
           P LV +ASQTG AE++A  TA  L  +G+   + AL+  +L+ L    R LF+ ST+G+G
Sbjct: 53  PWLVGYASQTGSAEQLAWQTARMLHTAGVPTRVAALSDISLDDLMQTERALFVVSTYGEG 112

Query: 452 DAPDSARGFEKRLRQAAGQSLSHVQYAILALGDRHYTQFCGFGHTLDHGLRQCGATPLFP 511
           D PD+A  F  RL  A  Q+L H+ + +L LGD HY  FCGFG TL   L++ GA  LF 
Sbjct: 113 DPPDNASLFATRLMNAR-QNLPHLHFGVLMLGDSHYVHFCGFGQTLSKWLQRSGAQALFA 171

Query: 512 LVEVDRMAASALRKWDSELAAHGLQAGVAELLPTSAPTWQSWTLRRRVLMNPGSQGEPLY 571
            V  D     AL  W   L+     AG  +     AP +Q W L  R  +NP S G P +
Sbjct: 172 SVAADNGDNKALHTWQHHLSH---LAGTNDTPDWQAPAYQQWRLAARHRLNPDSAGGPTF 228

Query: 572 HLELQPQSGPLPAWQAGALVQVQPRHAPDRIALLLQRLQLDGATRVRHQGAECTLAEALA 631
           H+EL+  +G    W+AG LVQV                                      
Sbjct: 229 HVELEA-TGDDATWEAGDLVQV-------------------------------------- 249

Query: 632 GSILPPHPANDAQALADQLQPLAARSYSVASVPQDGALHLLVRQVQHEDG-LGLASGWLT 690
              L P         ADQ +P   R YSVAS+P DG LHLL+RQ + EDG LGLASGWLT
Sbjct: 250 ---LAP---------ADQERP---REYSVASIPADGRLHLLIRQERREDGTLGLASGWLT 294

Query: 691 EYAPLEGALPLRLLDNAGFAPLDTDA-PAIFIGNGSGLAGLRSHLRARVQAGQKRNWLLF 749
           E A +   + LRL  ++ F   D    P I IGNG+GLAGLRSHL+AR   G +RNWL+F
Sbjct: 295 EQAEIGATVDLRLRPHSNFRLGDNQHRPLILIGNGTGLAGLRSHLKARAANGMQRNWLVF 354

Query: 750 GERNERYDFLYREELLQWLEQGQLARLDLAFSRDQAERLYVQDRLREAAPELRQWIAQGA 809
           GERN   DF YR+E+  W +QG L R D+ FSRDQAER+YVQD+LRE A ++R W+A  A
Sbjct: 355 GERNAANDFYYRDEIEAWQKQGVLERADIVFSRDQAERIYVQDKLREQAEQVRAWLAADA 414

Query: 810 VLYVCGSLEGMAAGVDAVLNATLGEQTVHALIEQNRYRRDVY 851
            +YVCGSLEGMA GV+A L   +G   V  LI+Q RYRRDVY
Sbjct: 415 AIYVCGSLEGMAGGVEASLTEIIGSTGVEQLIQQGRYRRDVY 456


>gi|152980545|ref|YP_001355312.1| iron-regulated membrane protein
           [Janthinobacterium sp. Marseille]
          Length = 376

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 185/381 (48%), Gaps = 38/381 (9%)

Query: 2   FKKIWFQLHWFIGITAGTLLMTIGVTGAMLAFREEILEAMNPGVMHVQLR--QQATLTPQ 59
            ++IW ++H ++ ++ G +L  +GV GA+L   + + +  +P            +T+TP 
Sbjct: 17  MRRIWVKIHRWLALSVGWILAVVGVLGAILILAQPLDKWAHPEFFKADTAAGSASTVTPV 76

Query: 60  QILDRLHQARPEQRVTNMLLSSESGASVRVIFAPPPGVHRGEIRYV----DPYTGAL-LP 114
             L+ + Q    Q +T+    S+S  ++R     PP V  GE  +V    +P++G + L 
Sbjct: 77  VTLEAIRQ----QLITD--FGSKSNFTLR-----PPRVA-GETFWVLVRGEPWSGTVYLN 124

Query: 115 PLKG---------AAFFEFTERFHRWLLLPTEIGKIVLGTLALSLLMLTLSGLYLRWPRR 165
           PL G           F  F  + H  LLL  + GK +L  +AL+ L+L +SGL L WP+R
Sbjct: 125 PLTGREQGRRGEYDGFVNFAFKLHSALLL-KDTGKAILAWIALAYLVLLISGLVLWWPKR 183

Query: 166 -PWSLRAWLRLDWQLQGRSFLWNLHSVIGTWLLVIYVLLATTGAYWALDWFKDGLNTLAG 224
            P SLR  L     L+G   L+++H + G  L ++  +   TGAY A       + TL+G
Sbjct: 184 WPPSLRIELGKG-LLRG---LFDMHRIGGAVLGLLIAVSVATGAYMAWRPLGQFVTTLSG 239

Query: 225 ESRRAPMQRDAGKKKEAAHAAVPLELTKAWNSFLALAPDYQNAQLRLPEQGSQPLQIFFL 284
            +   P       K+E+A  A+ + L +      A+ P      ++LP + +QP+++   
Sbjct: 240 STAIKP---PVLTKEESAKPAI-VTLDQLVARGQAVFPSDPVTYVQLPAKANQPIRLRLR 295

Query: 285 GHDAPHERARNRMVVLPQTGEVKQLERYEDKSRGGKLLTAIYPLHMGTYFGLPGRIIMAI 344
             D PH      + + P+TGEV    R++    G K  + +YPLH G   G+    +  +
Sbjct: 296 LADDPHPNGLTSVYLQPKTGEVLAAYRWDQLDPGAKAFSFVYPLHTGELGGVALEALTFL 355

Query: 345 ASLMMPLFGITGWMLYLDRRR 365
           + L + + G+TG  L+  RR+
Sbjct: 356 SGLALGMLGVTGIWLWWRRRK 376


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.137    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,998,270
Number of extensions: 83203
Number of successful extensions: 287
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 280
Number of HSP's successfully gapped: 2
Length of query: 851
Length of database: 1,221,021
Length adjustment: 91
Effective length of query: 760
Effective length of database: 884,594
Effective search space: 672291440
Effective search space used: 672291440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 134 (56.2 bits)