BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0914.p
         (478 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980231|ref|YP_001353250.1| phospholipase D family protein ...   430   e-121
gi|152981328|ref|YP_001354786.1| cardiolipin synthetase II [Jant...   145   5e-36

>gi|152980231|ref|YP_001353250.1| phospholipase D family protein
           [Janthinobacterium sp. Marseille]
          Length = 462

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/443 (48%), Positives = 299/443 (67%), Gaps = 12/443 (2%)

Query: 32  AACSSLPTI---VPDMDRQSARTIQMKGGRGVLSAAQSKAVLDKLRAQNADNTILDRHVA 88
           +AC+SLP +      +  Q + TIQ   G G LS  +++++L   R   +DN  L    A
Sbjct: 22  SACASLPDVQYLKTSLQPQDSATIQTAQG-GTLSKEKTESLL--ARRLRSDNVALPELAA 78

Query: 89  IEGAITGSPLVTGNKVTLLIDGPATYASMQQAIQAARYHINMETYIMEDDEVGRQFADLL 148
           +E A TGSPL+ GNK+TLL DGP T  +M  AI+ A+ HIN+ETYI  +D +G +FADLL
Sbjct: 79  LEEAATGSPLIAGNKLTLLNDGPDTLRAMIAAIRTAKDHINLETYIFNEDAIGTEFADLL 138

Query: 149 IAMQNKGVQVNLMYDSVGALNTPRAFFQSMIDAGIHVLEYNPLNPTQLRKDWEVNQRDHR 208
           +  Q  GVQVN++YDS+G+L+TP  FFQ + D+GI++LE++P+NP +      +N RDHR
Sbjct: 139 MQKQRDGVQVNIIYDSIGSLSTPPEFFQKLRDSGINLLEFSPVNPFKRALSTRLNNRDHR 198

Query: 209 KLLVVDGKTAFVGGINISSVYSSGSFSSRQKKPRVNQQGQQIPWRDTQVRIDGPVALEFQ 268
           K+LVVDG+ AF GGINISS YSS S     KK     +  ++ WRDT ++++GP    FQ
Sbjct: 199 KILVVDGRVAFTGGINISSDYSSKSLFRSSKK-----KDDELGWRDTHIQVEGPAVASFQ 253

Query: 269 KLFINTWQQQRGPDLGEHRYFPQVAVAGNEIVRAIGSSPDDPYSVIYATFISAIQHAEST 328
            LF+ TW  Q+   L    YFP +   G+++VR IGS P   Y V Y  ++ A+Q A+ +
Sbjct: 254 WLFMQTWVSQKTDSLATRNYFPPLTRMGDKVVRVIGSEPGGNYEV-YKAYVLAMQEAKVS 312

Query: 329 IYLTNAYFVPDPQLRDALKAAARRGVDVRLILPSHSDSSLVLYASRSFYAELLEAGIRIY 388
           I++TNAYFVPD QL  AL  AARRGVDV+++ P  SD  L+++A RS+Y+ELL AG+R++
Sbjct: 313 IHVTNAYFVPDVQLVKALTDAARRGVDVKMVFPGMSDVGLIMHAGRSYYSELLAAGVRVF 372

Query: 389 ERQDALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEINAVILSPAFGVQMKSMFERDLGA 448
           E Q ++LH+KTA+IDG WST+GSTNLD RSF++N+E+N + L  AFG  M+S F  DL  
Sbjct: 373 ELQASVLHAKTAVIDGYWSTVGSTNLDMRSFLHNREVNLIALDKAFGDVMESTFNEDLKN 432

Query: 449 SREITREQWGQRPISERMKEFGA 471
           S EI  E+W QRP S RMKE+ A
Sbjct: 433 SIEIKPEEWAQRPFSNRMKEWLA 455


>gi|152981328|ref|YP_001354786.1| cardiolipin synthetase II
           [Janthinobacterium sp. Marseille]
          Length = 388

 Score =  145 bits (366), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 166/374 (44%), Gaps = 27/374 (7%)

Query: 102 NKVTLLIDGPATYASMQQAIQAARYHINMETYIMEDDEVGRQFADLLIAMQNKGVQVNLM 161
           N + LL  G   + ++ +A   A   I +ETYI  DD       + LI    +GV VN++
Sbjct: 10  NDIQLLHCGGEYFPALIEAFDKANQEIYLETYIFADDATSHLIKEALIRAAQRGVIVNVL 69

Query: 162 YDSVGALNTPRAFFQSMIDAGIHVLEYNPLNPTQLRKDWEVNQRDHRKLLVVDGKTAFVG 221
            D +G  N   A      +   H + +   NP  +R       R HRK+ VVD   AF+G
Sbjct: 70  TDWLGTGNKESALLHREFEK--HGVVHRSFNPLFIRGI----ARMHRKVCVVDRVEAFLG 123

Query: 222 GINI-SSVYSSGSFSSRQKKPRVNQQGQQIPWRDTQVRIDGPVALEFQKLFINTWQQ--- 277
           G+NI   ++  G  +     PR         W D  VR+ GP+           W +   
Sbjct: 124 GLNIVDDMHDDGDVNIALPAPR---------W-DFAVRVTGPLVATIHWEVAVHWARLGS 173

Query: 278 ----QRGPDLGEHRYFPQVAVAGNEIVRAIGSSPDDPYSVIYATFISAIQHAESTIYLTN 333
                R     E R        G  I   +          I A ++ A+  A  +  L N
Sbjct: 174 LSLRTRWATFKELRQNKPSDARGPMIAGLVMRDNLRHRRTIQAAYLKALGTARHSALLAN 233

Query: 334 AYFVPDPQLRDALKAAARRGVDVRLILP-SHSDSSLVLYASRSFYAELLEAGIRIYERQD 392
            YF P  +LR+ L  AA RGVDV L+L   H     V+  +RSFY  LL+AG++I E + 
Sbjct: 234 PYFAPGRKLRNGLAQAAMRGVDVTLLLGIGHYRFQDVV--ARSFYRRLLKAGVKIVEYRK 291

Query: 393 ALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEINAVILSPAFGVQMKSMFERDLGASREI 452
             LH K A+ID  W+T+GS+N D  S   NQE N V+L   F  +++   E+ +     +
Sbjct: 292 THLHGKVAVIDDTWATVGSSNCDGFSLFLNQEANVVVLDTEFAQKLRVHIEQGIADGVVM 351

Query: 453 TREQWGQRPISERM 466
             E++   P+ +R+
Sbjct: 352 NWEEYANIPLYKRI 365


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,041,464
Number of extensions: 40168
Number of successful extensions: 151
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 145
Number of HSP's successfully gapped: 3
Length of query: 478
Length of database: 1,221,021
Length adjustment: 87
Effective length of query: 391
Effective length of database: 899,382
Effective search space: 351658362
Effective search space used: 351658362
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)