BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0910.p
         (278 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980504|ref|YP_001352340.1| prolipoprotein diacylglyceryl t...   430   e-122

>gi|152980504|ref|YP_001352340.1| prolipoprotein diacylglyceryl
           transferase [Janthinobacterium sp. Marseille]
          Length = 265

 Score =  430 bits (1106), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/263 (76%), Positives = 237/263 (90%)

Query: 1   MLVHPMPDPVAFHIGPLAVHWYGLMYLLAFAQFIAVGRLRIKQPHIAAVGWKKEDLDDML 60
           M +HPMPDPVA  IGPLA+ WYGLMYL AFAQFI + R+RIKQPHIA  GWKKED+DDML
Sbjct: 1   MWIHPMPDPVALSIGPLAIRWYGLMYLAAFAQFIWLARIRIKQPHIARAGWKKEDIDDML 60

Query: 61  FYGVLGVVLGGRLGEILFYNPAYYFAHPADMIAVWKGGMSFHGGFLGVLLAMYLWGRKRG 120
           FYGVLGV++GGRLGE+LFY+P+YYF++P ++  VWKGGMSFHGGFLGVLLAM +W R++G
Sbjct: 61  FYGVLGVIIGGRLGEVLFYDPSYYFSNPLEIFKVWKGGMSFHGGFLGVLLAMSIWARRQG 120

Query: 121 RNLMDIMDFIAPLVPLGYAAGRLGNFINAELPGRPADPSLPWAMIWPNVDNIPRHPSPIY 180
           RN++D+ DFIAP+VPLGYA GRLGNFINAELPGR AD SLPWAMIWPNVDN+PRHPSP+Y
Sbjct: 121 RNVLDVWDFIAPMVPLGYAFGRLGNFINAELPGRIADASLPWAMIWPNVDNLPRHPSPLY 180

Query: 181 QMLVDGILLFIILWIYARHARPRMAVAAMFSLLYGCARFFTEYFRVPDYEVHFGGITISA 240
           Q LVDG+L+FI+LW++AR  RPRMAV  MF+LLYG ARFFTEYFR+PDYEVHF GITISA
Sbjct: 181 QALVDGLLMFILLWLFARKERPRMAVGGMFALLYGSARFFTEYFRMPDYEVHFAGITISA 240

Query: 241 GQMLSVPMIVLGIILLVLAYKLK 263
           GQMLSVP+IVLGI++L++AY+ K
Sbjct: 241 GQMLSVPLIVLGIVMLLIAYRKK 263


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.330    0.147    0.481 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 694,735
Number of extensions: 28935
Number of successful extensions: 89
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 196
Effective length of database: 917,867
Effective search space: 179901932
Effective search space used: 179901932
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 129 (54.3 bits)