BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0903.p (488 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980461|ref|YP_001354003.1| glucose-6-phosphate 1-dehydroge... 770 0.0 >gi|152980461|ref|YP_001354003.1| glucose-6-phosphate 1-dehydrogenase [Janthinobacterium sp. Marseille] Length = 489 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/489 (74%), Positives = 416/489 (85%), Gaps = 2/489 (0%) Query: 1 MATSDFDLVLFGGTGDLSMRKLLPALYARDRGRDLPPNARIICLGREEKSREDFLKLVEK 60 MA +DFDLVLFGG GDLSMRKL+PALYARDR DLP A+IIC+GR ++ +F++ V + Sbjct: 1 MALTDFDLVLFGGGGDLSMRKLIPALYARDRAGDLPATAQIICVGRNTRTAAEFIETVNE 60 Query: 61 DSKPHVPPSNLDAAVWERFTNRLQYASVNAKDAASFAHLKEALRDIDGLARVFYLATPPS 120 ++K H+ + AVWE+F R++Y +++A D +++ L + LRD + RVFYLATPP+ Sbjct: 61 NAKSHINEKTFNQAVWEKFCARIKYVALDASDESTYQPLNDVLRDSSAITRVFYLATPPT 120 Query: 121 LFASICENLSKAGLVTPSARVVLEKPLGRDLESARDINAQVGRFFQESQIFRIDHYLGKE 180 LFA IC NLS GL T RVVLEKPLGRDL SA+ IN +V + F+ESQI+RIDHYLGKE Sbjct: 121 LFAKICHNLSARGLATEQTRVVLEKPLGRDLASAKQINQEVSQVFKESQIYRIDHYLGKE 180 Query: 181 AVQNLLALRFGNVLFEPLWRREWISDVQITIAEELGVGGRFDYYDTSGALRDMLQNHLLQ 240 AVQNLLALRFGNVLFEPLWRREWISDVQITIAEELGVG R YY+TSGALRDM+QNHLLQ Sbjct: 181 AVQNLLALRFGNVLFEPLWRREWISDVQITIAEELGVGNRMGYYETSGALRDMMQNHLLQ 240 Query: 241 LLCIVAMEPPVSNSADAVRDEKLKVLRSLKRFTPTTLAMNVVRGQYRAGHVDGVAVPAYR 300 LLCIVAMEPP+S + DAVRDEKLKVLRSLK FT TLA NVVRGQYRAGHVDGVAVPAYR Sbjct: 241 LLCIVAMEPPLSVTPDAVRDEKLKVLRSLKPFTQNTLAKNVVRGQYRAGHVDGVAVPAYR 300 Query: 301 KEADANPDSRTETYVAVKAEIDTWRWAGVPFYLRTGKRMADSLAEIVVRFKSVPHSIFAH 360 +E +A+PDS TET+VAVKAEIDTWRWAGVPFYLRTGKRMAD LAEIVVRFKS+PHSIFA Sbjct: 301 QEKNADPDSNTETFVAVKAEIDTWRWAGVPFYLRTGKRMADQLAEIVVRFKSIPHSIFAQ 360 Query: 361 QNDT--PNCLVIRLQPDEGLHMNLMAKQPGDGMRLRPVELELDFREKFKTPRMDAYERLL 418 + PNCLVIRLQPD+GL +NLMAK PGDGMRL+PVELELDF E FK PRMDAYERLL Sbjct: 361 STSSFQPNCLVIRLQPDDGLQLNLMAKTPGDGMRLKPVELELDFAETFKAPRMDAYERLL 420 Query: 419 LDVLRGHLTLFMRSDELEAAWEWVEPILNYWDQQEADPVPYNAGTWGPAAASALIGRDGL 478 LDVLRG LTLFMRSDELEAAWEWVEP+L YW+Q+ +P+PY +GTWGPAA+S+LIGRDGL Sbjct: 421 LDVLRGQLTLFMRSDELEAAWEWVEPVLRYWEQEGNEPLPYASGTWGPAASSSLIGRDGL 480 Query: 479 QWREEALPE 487 QWREEALPE Sbjct: 481 QWREEALPE 489 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.137 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,187,756 Number of extensions: 49557 Number of successful extensions: 108 Number of sequences better than 1.0e-08: 1 Number of HSP's gapped: 107 Number of HSP's successfully gapped: 1 Length of query: 488 Length of database: 1,221,021 Length adjustment: 87 Effective length of query: 401 Effective length of database: 899,382 Effective search space: 360652182 Effective search space used: 360652182 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)