BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0877.p (426 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 186 2e-48 gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate... 179 3e-46 gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 162 4e-41 gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transami... 142 5e-35 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 140 2e-34 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 186 bits (472), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 130/398 (32%), Positives = 198/398 (49%), Gaps = 43/398 (10%) Query: 38 LWDVEGRRFIDFAAGIAVLNTGHRHPKLLDAMRAQMEKF--THTAYQIVPYASYVELAER 95 LWD +G+R++D + + ++ GH HP+L+ A+ Q + T A+ +++L Sbjct: 37 LWDEDGKRYMDMMSAYSAVSFGHSHPQLVQALTQQAGQLAVTSRAFYTDQLGRFLQLLCE 96 Query: 96 INAVTPGHYPKKTAFFSTGAEAVENAIKIARAYT----GRPG----VIAFAGGFHGRTMM 147 + + K ++G EAVE ++K AR + G P +I AG F GR+ Sbjct: 97 MTGM------DKALPMNSGTEAVETSLKAARKWAYKVKGVPDQQAQIIVCAGNFAGRSTT 150 Query: 148 GMALTGKVAPYKLGFGPFPGDVFHAPYPSALNGISTEDALEAVKGLFKSDIEAKRVAAII 207 + + + A Y+ GFGPF G PY A ALEA AA + Sbjct: 151 IVGFSSE-AQYREGFGPFDGGFVTIPYGDAA-------ALEAAI--------TPHTAAFL 194 Query: 208 LEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQSGYGRTGKLFAMEHYDVLPD-L 266 +EP+QGEGG P ++ R IC ILLI DEVQ+G GRTG+L A +H + PD L Sbjct: 195 VEPIQGEGGIIVPPDAYLAQCREICTRRNILLICDEVQTGLGRTGRLLACDHEGIRPDGL 254 Query: 267 MTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGTYAGNPLAVASALAVLDVMEEEKLVAR 326 + G +P+SA R+E+MD PG G T+ GNPLA A A L ++ + +L+A Sbjct: 255 ILGKALGGGLLPVSAFLARSEVMDVFTPGDHGSTFGGNPLAAAVGYAALSLLRDGELIAA 314 Query: 327 GQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAVEFADPATGKPDAEYTKKVQQHALSNG 386 ++ G +L+E L LR P I VRG G ++ +E +P + + + NG Sbjct: 315 AEQRGQRLREGLNALRH--PAIRSVRGKGLLIGLEL------EPQVITARSFCERLMENG 366 Query: 387 LLLLSCGSYGNVIRFLFPLTIPDAVMDEALGILANAIK 424 +LS ++ V+RF PL I +D AL I+ + + Sbjct: 367 --VLSKETHHTVVRFAPPLIITAEAIDAALRIIEHVFE 402 >gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate aminotransferase [Janthinobacterium sp. Marseille] Length = 431 Score = 179 bits (454), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 137/413 (33%), Positives = 201/413 (48%), Gaps = 46/413 (11%) Query: 32 RAANAELWDVEGRRFIDFAAGIAVLNTGHRHPKL----------------LDAMRAQMEK 75 +A NA L D GR +IDF AG LN GH +P + LD + + Sbjct: 24 KAQNAVLTDEGGRSYIDFLAGAGTLNYGHNNPTMKQAVIDYLSEDGIVHGLDMATSAKKT 83 Query: 76 FTHTAYQIVPYASYVELAERINAVTPGHYPKKTAFFS-TGAEAVENAIKIARAYTGRPGV 134 F T + S+V L P K F TG AVE AIK+AR TGR V Sbjct: 84 FLQT------FESHVLL--------PRKMQYKIQFTGPTGTNAVEAAIKLARNVTGRQMV 129 Query: 135 IAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALNGISTEDALEAVKGLF 194 I+F GFHG ++ +ALTG ++ G DV APY S G++ + K + Sbjct: 130 ISFTNGFHGVSLGSLALTGN-RKFRDAAGVSLNDVHRAPY-SGYFGMNIDTIAMLDKLIV 187 Query: 195 KSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQSGYGRTGKL 254 AAII+E VQGEGG A ++++ L +C H ILLI D++Q+G GRTG Sbjct: 188 DPSSGVDLPAAIIVECVQGEGGLNVAGLNWLKKLEQLCQRHEILLIVDDIQAGCGRTGTF 247 Query: 255 FAMEHYDVLPDLMTMAKSLAG-GMPLSAVNGRAEIMDAPAPGGLGGTYAGNPLAVASALA 313 F+ E + PD++T++KSL+G G+P++ + + + +D PG GT+ GN LA +A A Sbjct: 248 FSFEPAGIKPDIITLSKSLSGFGLPMAVLLMKPQ-LDVWKPGQHNGTFRGNNLAFVTATA 306 Query: 314 VLD-VMEEEKLVARGQRLGDKLQEHLKELRSAVP--QIAEVRGVGAMVAVEFADPATGKP 370 L + + Q+ ++ L +L ++ P Q+ RG G M + ADPA Sbjct: 307 ALQHYWGDNRFQMAIQKKSLVIEAFLDKLVASYPDAQLTR-RGRGMMQGIACADPA---- 361 Query: 371 DAEYTKKVQQHALSNGLLLLSCGSYGNVIRFLFPLTIPDAVMDEALGILANAI 423 ++ A NGL++ + G V++ L PLTI + L IL +A+ Sbjct: 362 ---LADRITSIAFQNGLIIETSGGEDEVVKLLMPLTIEQETLLAGLDILEHAV 411 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 162 bits (409), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 124/349 (35%), Positives = 175/349 (50%), Gaps = 61/349 (17%) Query: 38 LW--DVEGRRFIDFAAGIAVLNTGHRHPKLLDAMRAQMEKFTHTAYQIVPYASYVELAER 95 +W D +G+R++D+ G AV GH + DA+ Q +K + + A Y E + Sbjct: 28 MWLTDHKGKRYLDYLQGWAVNCLGHSPQCIQDALNVQAKKLINPSP-----AFYNEPSIA 82 Query: 96 INAVTPGHYPKKTAFF-STGAEAVENAIKIARAY---------TGRPGVIAFAGGFHGRT 145 + A+ G+ FF ++GAEA E+A+K+AR + R +I F FHGRT Sbjct: 83 LAALLTGNSCFDRVFFANSGAEANESAVKLARKWGKLNKNAAGENRYEIITFDHSFHGRT 142 Query: 146 MMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALNGISTEDALEAVKGLFKSDIEAKRVAA 205 + M+ +GK D +AP + D +++VK L + A Sbjct: 143 LATMSASGKAG----------WDTIYAPQVPGFFKATLND-IDSVKKLI-----TDKTIA 186 Query: 206 IILEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQSGYGRTGKLFAMEHYDVLPD 265 ++LEPVQGEGG A +FM+ LRA+ EHG+LLI DEVQ+G GRTG+LF + + PD Sbjct: 187 VMLEPVQGEGGVIPATREFMQALRALTKEHGVLLIVDEVQTGMGRTGELFGYQLSGITPD 246 Query: 266 LMTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGTYAGNPL------AVASAL------- 312 +MT+ K + GG+PL+A+ R EI PG GGTY GNPL AVA AL Sbjct: 247 IMTLGKGIGGGVPLAAMLCREEIA-CFEPGDQGGTYNGNPLMTAVGNAVAQALLAPGFLQ 305 Query: 313 -----------AVLDVMEEEKLVARGQRLGDKLQEHLKELRSAVPQIAE 350 A+L + E+ L G+R GD L LK PQI E Sbjct: 306 SVKDKGAYLSAALLKLTEKHGLA--GER-GDGLLRALKLGSDIGPQIVE 351 >gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transaminase [Janthinobacterium sp. Marseille] Length = 439 Score = 142 bits (357), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 127/406 (31%), Positives = 194/406 (47%), Gaps = 31/406 (7%) Query: 42 EGRRFIDFAAGIAVLNTGHRHPKLLDAMRAQMEKFTHTAYQIVPYASYVELAERINAVTP 101 +GR+ +D AG+ +N GH HPK+ +A++ Q + + + E A + + P Sbjct: 39 DGRQILDGTAGLWCVNAGHGHPKITEAIQKQAASMDYAPLFQIGHPLAFEAATALAEIAP 98 Query: 102 GHYPKKTAFFSTGAEAVENAIKIARAY------TGRPGVIAFAGGFHGRTMMGMALTGKV 155 + F + G+E V+ A+KIA AY GR +I +HG G+A+ G Sbjct: 99 AGL-NRVFFCNDGSEGVDTALKIALAYHRIRGDAGRTRLIGRERAYHGVGFGGIAVGGIA 157 Query: 156 APYKLGFGP--------FPGDVFHAPYPSALNGISTEDALEAVKGLFKSDIEAKRVAAII 207 K FGP P D+ Y L E A E + L + VAA+I Sbjct: 158 GNRK-QFGPGLAADHLRHPLDIAKNAYSRGLPLHGAEMADELEQRLLALH-DPSTVAAVI 215 Query: 208 LEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQSGYGRTGKLFAMEHYDVLPDLM 267 +EP+QG G P ++ LR ICD+HG+LLI DEV +G+GR G F + + V PD++ Sbjct: 216 VEPLQGSTGVILPPKGYLEKLRVICDKHGVLLIFDEVITGFGRLGTAFGADFFGVKPDMI 275 Query: 268 TMAKSLAG-GMPLSAVNGRAEIMD-----APAPG---GLGGTYAGNPLAVASALAVLDVM 318 AK+L +P+ AV +I + APA G TY+G+PLA A+A+A LDV Sbjct: 276 VCAKALTNAAVPMGAVIVHEKIHETFMQMAPADSIELFHGYTYSGHPLAAAAAIATLDVY 335 Query: 319 EEEKLVARGQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAVEFADPATGKPDAEYTKKV 378 EE+L R + ++ L+ +P + +VR +G + VE A GKP A + Sbjct: 336 REEQLFQRAAGMAPYFEDAAHSLK-GLPFVKDVRNLGLVAGVELEGIA-GKPGARAYELF 393 Query: 379 QQHALSNGLLLLSCGSYGNVIRFLFPLTIPDAVMDEALGILANAIK 424 + GLL +++ PL I A +DE G + + +K Sbjct: 394 TKAFWDKGLLTRVT---ADILALSPPLIINKAQVDEMFGSITDILK 436 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 140 bits (352), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 112/386 (29%), Positives = 188/386 (48%), Gaps = 41/386 (10%) Query: 36 AELWDVEGRRFIDFAAGIAVLNTGHRHPKLLDAMRAQMEKFTHTAYQIVPYASYVELAER 95 A L+D +G+R++D + V GH +P++ A+R+Q++ H + V+L+E+ Sbjct: 45 AWLYDTDGQRYLDAISSWWVNMFGHANPRINSALRSQLDMLEHAMLAGFTHEPVVQLSEQ 104 Query: 96 INAVTPGHYPKKTAFFSTGAEAVENAIKIA------RAYTGRPGVIAFAGGFHGRTMMGM 149 + A T H + S GA AVE A+K++ + + + G +HG T+ + Sbjct: 105 LAART-NHELGHCFYASDGASAVEIALKMSFHSWRNNGLSDKREFVCLKGSYHGETIGAL 163 Query: 150 ALTGKVAPYKLGFGPFPGDVFHAPYPSALNGISTEDALEAVKGLFKSDI----------- 198 A+T P D + A A + + + DA A G +D+ Sbjct: 164 AVTDV---------PIFRDAYDAMLQHA-HVVMSPDARAARDGETAADVARRAASALETL 213 Query: 199 ---EAKRVAAIILEP-VQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQSGYGRTGKL 254 +K +AA+I+EP VQ G +++ +RA+CD++ + LIADE+ G GRTG Sbjct: 214 LQERSKHIAALIVEPLVQCATGMAMYDPVYLQEVRALCDKYQVHLIADEIAVGCGRTGTF 273 Query: 255 FAMEHYDVLPDLMTMAKSLAGG-MPLSAVNGRAEIMDAPAPGGL------GGTYAGNPLA 307 FA E V PD + ++K ++GG +PLS V R EI + G + +Y GNPLA Sbjct: 274 FACEQAAVWPDFLCLSKGISGGYLPLSLVMTRDEIYQSFYHGDVTRGFLHSHSYTGNPLA 333 Query: 308 VASALAVLDVMEEEKLVARGQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAVEFADPAT 367 +ALA L + EE+ ++ + +L E L L +A PQ++ R G + A + A Sbjct: 334 CRAALATLAIFEEDDVINANRLRAARLTEALAPL-AAHPQVSNFRQRGMIWAFD-AVIDN 391 Query: 368 GKPDAEYTKKVQQHALSNGLLLLSCG 393 + + ++++ AL + LLL G Sbjct: 392 AEAASTFSRRFFTTALEHELLLRPIG 417 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.319 0.136 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 998,727 Number of extensions: 41617 Number of successful extensions: 166 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 145 Number of HSP's successfully gapped: 6 Length of query: 426 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 340 Effective length of database: 903,079 Effective search space: 307046860 Effective search space used: 307046860 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)