BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0838.p
         (293 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981312|ref|YP_001351959.1| gluconolactonase [Janthinobacte...   146   1e-36

>gi|152981312|ref|YP_001351959.1| gluconolactonase
           [Janthinobacterium sp. Marseille]
          Length = 296

 Score =  146 bits (369), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 142/297 (47%), Gaps = 10/297 (3%)

Query: 2   NAQLLVDGHHELGEGVLWCERSQSLFWTDIHASRLWNHDPHSGATRSWSMPERLCCFAFT 61
           N Q ++    +LGE  LW     +L+W DI    +    P +   + W MP    C A  
Sbjct: 5   NIQPILPVRMQLGECPLWHPEEAALYWIDIDGRAVHRFIPANDVHQQWDMPSEPGCIALN 64

Query: 62  ADPERLLIGLESRLAFFNLNTAAITPICRIEDDLPSTRLNDGRCDRQGRFVFGTLNEDAS 121
           A    LL+ L S LA  +  +  +T I     D  +TR NDGRCD  GR   G++ E   
Sbjct: 65  AG-SGLLVALRSGLALLDTTSGQLTQIADAPYDPATTRFNDGRCDAAGRLWTGSIYEPRD 123

Query: 122 REPIASFYRLNADLSLERLALPGIAISNSICFSLDGKLMYHCDSMAGKIMVCDYDPASGA 181
               A +   + ++   R +     +SN + FS D + MYH D+   +I   ++D  S  
Sbjct: 124 HANAALYCVEHGEI---RDSDKRATVSNGVAFSPDNRTMYHADTTTHRIFAYEFDIGSAT 180

Query: 182 VSGQRVFADLAQQP-----GGPDGSTVDAEGYVWNAQWGGSRVVRFAPDGVIDRIIDLPT 236
           +   RV    +        G PDG+ VD+EG  W A + G R++R +P G I   + LP 
Sbjct: 181 LGEGRVLKQFSTDKQNNYGGRPDGAAVDSEGNYWCAMYEGGRILRLSPAGDILSELALPV 240

Query: 237 AQPSCVAFGGAALDTLFVTTAHEGMSAQQRAQDALAGAVFAVPQVGVRGLPEVRFAA 293
             P+ +AFGG  L TL++T+  +   A +  Q  L+G V ++ +V V GLPE  + A
Sbjct: 241 RCPTMMAFGGDDLRTLYITSVSKNRPAAELEQYPLSGCVLSL-RVDVPGLPEHFYLA 296


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 746,709
Number of extensions: 32272
Number of successful extensions: 60
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 211
Effective length of database: 917,867
Effective search space: 193669937
Effective search space used: 193669937
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)