BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0831.p (518 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981231|ref|YP_001353367.1| ABC-type transport systems, ATP... 238 8e-64 gi|152981256|ref|YP_001355254.1| ABC-type uncharacterized transp... 234 1e-62 gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transp... 124 2e-29 gi|152980901|ref|YP_001351950.1| ABC transporter ATP-binding pro... 114 1e-26 gi|152980136|ref|YP_001354236.1| ABC-type branched-chain amino a... 108 7e-25 >gi|152981231|ref|YP_001353367.1| ABC-type transport systems, ATPase component [Janthinobacterium sp. Marseille] Length = 511 Score = 238 bits (606), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 170/510 (33%), Positives = 274/510 (53%), Gaps = 40/510 (7%) Query: 1 MSNILEMRGIEKSFPGVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSG-VYPHGSY 59 M N LE+ I K +P V A + +NL+V+ GEIHA++GENGAGKSTLMK++ G V P Sbjct: 1 MINRLELHSITKRYPSVVANDGINLSVKPGEIHAVLGENGAGKSTLMKIIYGSVKPD--- 57 Query: 60 SGDIVYKGEVRAFKDIRDSEHLGIIIIHQELALVPLLSVMENLFLG-------NEQARGG 112 +G +++ G+ + + LGI ++ Q +L L+V+EN+ LG +E AR Sbjct: 58 AGKVLWNGKEVHIANPAMARELGIAMVFQHFSLFDTLTVVENIALGLPHDTKLDELAR-- 115 Query: 113 VIDWEQSYVRAKELLAKVGLKESPQALVGDLGVGKQQLIEIAKALSKEVKLLILDEPTAS 172 R + + GL+ PQ V L VG+ Q +EI +AL + +LLILDEPT+ Sbjct: 116 ---------RISDTAEQYGLELEPQRHVHTLSVGECQRVEIVRALLAKPQLLILDEPTSV 166 Query: 173 LNESDSDALLELLLELKRQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRAEPIS 232 L + L E L +L +G + + ISHKL+EI + D+ TV+R G D R E S Sbjct: 167 LTPQAVEKLFETLRKLAAEGCSILYISHKLDEIRALCDTCTVVRAGKNTGICDPREE--S 224 Query: 233 EDRIIQHMVGREMAD-RYPQRDPQIGEVIFEVRDWRV--HHPLHSDRLAIKDVNMTVRAG 289 + + M+G E ++ R P G+ + V++ + +HP ++ + D+N +RAG Sbjct: 225 AASLSRMMIGCEPPPIKHVLRSP--GQTLLAVKNLSLKKNHPFATE---LSDINFELRAG 279 Query: 290 EIVGIAGLMGAGRTELAKSIFG---RAYGKKITGQAFLHGKEVDLSTIEKAIAKGIAYVT 346 EI+GIAG+ G G+ EL ++ G RA + I L G+ V + +G+ +V Sbjct: 280 EILGIAGVSGNGQQELLAALSGEDPRAEAQMI----LLQGERVGHFNPAQRRERGLGFVP 335 Query: 347 EDRKGDGLVLEEDIKKNISLANLGGVS-ERTVIDEAREYKIAADFKQQMRIRCSSVLQKV 405 E+R G G V + + NI L++ G + I + K+A D ++ ++ Sbjct: 336 EERLGRGAVPDMSLADNILLSHQTGATISSGFIRKHAIVKMATDVIERFVVKAGGPHAAA 395 Query: 406 VNLSGGNQQKVVLSKWLFSQPEVLILDEPTRGIDVGAKFEIYNIISKLAAEGKCIIMISS 465 +LSGGN QK ++ + + P+VLI+ +PT G+DVGA +I + L G +++IS Sbjct: 396 RSLSGGNLQKYIVGREVMRNPKVLIVAQPTWGVDVGAAAQIRAELVALRDAGCALLVISE 455 Query: 466 EMPELLGMCDRIYVMNEGQFVGHLSKAEAT 495 E+ EL + DR+ V+ +G+ ++ + AT Sbjct: 456 ELDELFEISDRLMVIAKGRLSPSIASSAAT 485 Score = 86.7 bits (213), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 14/224 (6%) Query: 282 VNMTVRAGEIVGIAGLMGAGRTELAKSIFGRAYGKKITGQAFLHGKEVDLSTIEKAIAKG 341 +N++V+ GEI + G GAG++ L K I+G K G+ +GKEV ++ A G Sbjct: 23 INLSVKPGEIHAVLGENGAGKSTLMKIIYGSV--KPDAGKVLWNGKEVHIANPAMARELG 80 Query: 342 IAYVTEDRK-GDGLVLEEDIKKNISLANLGGVSERTVIDEAREYKIAADFKQQMRIRCSS 400 IA V + D L + E+I + R + D A +Y + + ++ Sbjct: 81 IAMVFQHFSLFDTLTVVENIALGLPHDTKLDELARRISDTAEQYGLELEPQRH------- 133 Query: 401 VLQKVVNLSGGNQQKVVLSKWLFSQPEVLILDEPTRGIDVGAKFEIYNIISKLAAEGKCI 460 V LS G Q+V + + L ++P++LILDEPT + A +++ + KLAAEG I Sbjct: 134 ----VHTLSVGECQRVEIVRALLAKPQLLILDEPTSVLTPQAVEKLFETLRKLAAEGCSI 189 Query: 461 IMISSEMPELLGMCDRIYVMNEGQFVGHLSKAEATQESIMRAIM 504 + IS ++ E+ +CD V+ G+ G E + S+ R ++ Sbjct: 190 LYISHKLDEIRALCDTCTVVRAGKNTGICDPREESAASLSRMMI 233 >gi|152981256|ref|YP_001355254.1| ABC-type uncharacterized transport systems, ATPase component [Janthinobacterium sp. Marseille] Length = 523 Score = 234 bits (596), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 185/526 (35%), Positives = 277/526 (52%), Gaps = 44/526 (8%) Query: 4 ILEMRGIEKSFPGVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGSYSGDI 63 ILE+ G+ K F LN+++L V GE+H ++GENGAGKSTL ++ GV H +G I Sbjct: 3 ILEIAGVTKRFGSHLVLNDISLNVEAGEVHCLLGENGAGKSTLCNLIFGV--HRPDAGLI 60 Query: 64 VYKG-EVRAFKDIRDSEHLGIIIIHQELALVPLLSVMENLFLGNEQARGGVIDWEQSYV- 121 Y G E R E LGI ++HQ +LV +SV+ENL LG QA +Q ++ Sbjct: 61 KYDGGEFRPSGPAHALE-LGIAMVHQHFSLVSNMSVVENLMLGRAQAI-----LKQDFII 114 Query: 122 -RAKELLAKVGLKESPQALVGDLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDA 180 R +EL + LK P +VGDL VG++Q IEI K L +LL+LDEPTA L + D+ Sbjct: 115 RRMQELADEYDLKIDPHCIVGDLSVGERQRIEIIKCLLSNPRLLLLDEPTAVLPPEEVDS 174 Query: 181 LLELLLELKRQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRAEPISEDRIIQHM 240 LL + ++ G IL++HKL EI+KVAD +VLR G V++ C E +++ M Sbjct: 175 LLAVCRKVAESGRGVILVTHKLAEIAKVADRTSVLRQGRIVESV-CM-EGADMHALVRSM 232 Query: 241 VGREMADRYPQRDPQIGEVIFEVRD---------------------WRVHHPLHSDRLAI 279 VGR++ +G + +D ++ D+ + Sbjct: 233 VGRDVKSGDSVLAATLGILSDAAQDAANATPAAAAVVDSRSLGLPALQLQGLSFQDKDGV 292 Query: 280 ---KDVNMTVRAGEIVGIAGLMGAGRTELAKSIFGRAYGKKITGQAFLHGKEVDL--STI 334 DV+++V GEIVGIAG+ G G++EL I G TG A G++ DL S+ Sbjct: 293 TRLSDVHLSVARGEIVGIAGVEGNGQSELGAIIAGLL---TPTGGAMKIGEQ-DLTGSSA 348 Query: 335 EKAIAKGIAYVTEDRKGDGLVLEEDIKKNISLANLGGVSERTVIDEAREYKIAADFKQQM 394 + G + EDR + E + +N+ L +L S ++D + K AA + Sbjct: 349 QDITDAGAGIIPEDRHAVACISELSVAENLFLGSLEKFSRFGLLDREKMAKQAATMMTEF 408 Query: 395 RIRCSSVLQKVVNLSGGNQQKVVLSKWLFSQPEVLIL-DEPTRGIDVGAKFEIYNIISKL 453 +R +S + +LSGGNQQK VL++ L P + +L +PTRG+DVGA ++N I Sbjct: 409 DVRATSPNAPMSSLSGGNQQKAVLARELSLDPLIFLLAAQPTRGLDVGAVEAVFNRIRTA 468 Query: 454 AAEGKCIIMISSEMPELLGMCDRIYVMNEGQFVGHLSKAEATQESI 499 A+ G +++ISS++ EL+ + DR+ V+ G VG L A +E I Sbjct: 469 ASNGLGVLLISSDLNELIAVSDRVAVLYRGAIVGELPADPANREKI 514 Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 19/238 (7%) Query: 16 GVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGSYSGDIVYKGEV----RA 71 GV L++V+L+V GEI I G G G+S L +++G+ + +G + GE + Sbjct: 291 GVTRLSDVHLSVARGEIVGIAGVEGNGQSELGAIIAGLL---TPTGGAMKIGEQDLTGSS 347 Query: 72 FKDIRDSEHLGIIIIHQE---LALVPLLSVMENLFLGNEQ--ARGGVIDWEQSYVRAKEL 126 +DI D+ G II ++ +A + LSV ENLFLG+ + +R G++D E+ +A + Sbjct: 348 AQDITDA---GAGIIPEDRHAVACISELSVAENLFLGSLEKFSRFGLLDREKMAKQAATM 404 Query: 127 LAKVGLK-ESPQALVGDLGVGKQQLIEIAKALSKEVKLLIL-DEPTASLNESDSDALLEL 184 + + ++ SP A + L G QQ +A+ LS + + +L +PT L+ +A+ Sbjct: 405 MTEFDVRATSPNAPMSSLSGGNQQKAVLARELSLDPLIFLLAAQPTRGLDVGAVEAVFNR 464 Query: 185 LLELKRQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRAEPISEDRIIQHMVG 242 + G+ +LIS LNE+ V+D + VL G V A+P + ++I M G Sbjct: 465 IRTAASNGLGVLLISSDLNELIAVSDRVAVLYRGAIVGELP--ADPANREKIGAMMSG 520 >gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transport system, duplicated ATPase component [Janthinobacterium sp. Marseille] Length = 533 Score = 124 bits (310), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 133/527 (25%), Positives = 249/527 (47%), Gaps = 75/527 (14%) Query: 3 NILEMRGIEKSFPGVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGSYSGD 62 ++L+++ ++ SF K +N+V+ ++ GE A+VGE+G+GK+ L + +Y G Sbjct: 2 SLLDIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSLLRLNQDATYGGK 61 Query: 63 IVYKGE------VRAFKDIRDSEHLGIIIIHQE--LALVPLLSVMENLFLGNEQARGGV- 113 I+++G+ A + +R ++ + +I QE AL PL ++ GN+ A + Sbjct: 62 ILFEGQDILQKTEAAMRSVRGND---VAMIFQEPMTALNPLFTI------GNQIAEVLML 112 Query: 114 ---IDWEQSYVRAKELLAKVGLKESPQ----ALVGDLGVGKQQLIEIAKALSKEVKLLIL 166 I + +R ELL K G+ E PQ + +L G++Q IA AL+ + KLLI Sbjct: 113 HEGISARAAALRTVELLDKTGIPE-PQRRALSYPHELSGGQRQRAMIAMALACKPKLLIA 171 Query: 167 DEPTASLNESDSDALLELLLELKR-QGIASILISHKLNEISKVADSITVLRDG------T 219 DEPT +L+ + ++ELL +L+R + +A ++I+H LN + AD + V+ G T Sbjct: 172 DEPTTALDVTIQVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGRLLEVAT 231 Query: 220 TVDTFDCRAEPISEDRII---QHMVGREMADRYPQRDPQIGEVIFEVRD-WRVHHPLHSD 275 T F E ++ + +V P + F+++ W P Sbjct: 232 TQQLFSAPREAYTKKLLASQPHQLVNVVSEAATPLLKAEQVSCTFDIKKGWFKKIPF--- 288 Query: 276 RLAIKDVNMTVRAGEIVGIAGLMGAGRTELAKSIFGRAYGKKITGQAFLHGKEVDLST-- 333 +A+ V++ V+ GE +GI G G+G++ L ++ R G + G+ G+ + + Sbjct: 289 -VAVDQVDVQVKPGETLGIVGESGSGKSTLGLALL-RLSGAHVKGEIAFDGQAITHQSRD 346 Query: 334 --------IEKAIAKGIAYVTEDRK-----GDGLVLEEDIKKNISLANLGGVSERTVIDE 380 ++ A ++ R G+GL L + LG R Sbjct: 347 ALRPLRARMQIVFQDPFASLSPRRTVEQIVGEGLALHQ--------PQLGPHGIR----- 393 Query: 381 AREYKIAADFKQQMRIRCSSVLQKVVNLSGGNQQKVVLSKWLFSQPEVLILDEPTRGIDV 440 K AD Q++ + + + SGG +Q++ +++ L +P++++LDEPT +DV Sbjct: 394 ----KAVADGLQEVGLSAEMMTRYPHEFSGGQRQRIAIARALVLKPDLILLDEPTSSLDV 449 Query: 441 GAKFEIYNIISKLAAE-GKCIIMISSEMPELLGMCDRIYVMNEGQFV 486 + ++ +++ L + G I IS ++ + M R+ VM +G+ V Sbjct: 450 SVQHQVLLLLADLQKKYGMAYIFISHDLAVIRAMAHRVMVMKDGRVV 496 Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 26/210 (12%) Query: 28 REGEIHAIVGENGAGKSTL---MKVLSGVYPHG--SYSGDIVYKGEVRAFKDIRDSEHLG 82 + GE IVGE+G+GKSTL + LSG + G ++ G + A + +R + Sbjct: 299 KPGETLGIVGESGSGKSTLGLALLRLSGAHVKGEIAFDGQAITHQSRDALRPLR--ARMQ 356 Query: 83 IIIIHQELALVPLLSV---------MENLFLGNEQARGGVIDWEQSYVRAKELLAKVGLK 133 I+ +L P +V + LG R V D Q + E++ + Sbjct: 357 IVFQDPFASLSPRRTVEQIVGEGLALHQPQLGPHGIRKAVADGLQEVGLSAEMMTRY--- 413 Query: 134 ESPQALVGDLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDALLELLLEL-KRQG 192 P G G++Q I IA+AL + L++LDEPT+SL+ S +L LL +L K+ G Sbjct: 414 --PHEFSG----GQRQRIAIARALVLKPDLILLDEPTSSLDVSVQHQVLLLLADLQKKYG 467 Query: 193 IASILISHKLNEISKVADSITVLRDGTTVD 222 +A I ISH L I +A + V++DG V+ Sbjct: 468 MAYIFISHDLAVIRAMAHRVMVMKDGRVVE 497 >gi|152980901|ref|YP_001351950.1| ABC transporter ATP-binding protein [Janthinobacterium sp. Marseille] Length = 579 Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 136/518 (26%), Positives = 233/518 (44%), Gaps = 70/518 (13%) Query: 16 GVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGS--------YSGDIVYKG 67 G + ++ A+ GE A+VGE+G+GKS + L G+ H S + GD + + Sbjct: 26 GPAVIKGISFALHRGECLALVGESGSGKSVTSRTLVGLTGHRSSLQADRLSFDGDDLRRF 85 Query: 68 EVRAFKDIRDSEHLGIIIIHQELALVPLLSV----MENLFLGNEQARGGVIDWEQSYVRA 123 R ++DIR +G ++ +L PL +V E L L + + ++ + Sbjct: 86 NERTWRDIR-GRRIGFVMQDALGSLDPLRTVGAEVAEPLKLHAKLTK------QEREEKV 138 Query: 124 KELLAKVGLKESPQALV---GDLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDA 180 LL VG+ + L+ L G +Q IA A++ +LLI DEPT +L+ + Sbjct: 139 IALLHSVGIPQPESRLMQYPHQLSGGLRQRALIASAIACNPELLIADEPTTALDAAVQAQ 198 Query: 181 LLELLLELKRQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRAEPISEDRIIQHM 240 +L+LL L+ A +++SH +S++AD + V+ G V+ A I D QH Sbjct: 199 VLDLLESLRTPDKAMLVVSHDFAVVSRLADRVAVMWHGEIVEQGPLDA--ILHDP--QHP 254 Query: 241 VGREM-------ADRYPQRD------------------PQI---GEVIFEVRDWR--VHH 270 + + R P R P + ++ EV + Sbjct: 255 YTKSLLSAVSSVQKRGPVRQKIAVTEDGHLATLPSELPPGVINNNPIVVEVNNLTKVFFG 314 Query: 271 PLHSDRLAIKDVNMTVRAGEIVGIAGLMGAGRTELAKSIFGRAYGKKITGQAFLHGK-EV 329 P S R+A+ +V+ +R GE VGI G G+G+T L + + G G L + Sbjct: 315 PDGSRRVAVSEVSFALRKGETVGIVGESGSGKTTLTRMVLGLETPN--VGNVRLRDQVWS 372 Query: 330 DLSTI-EKAIAKGIAYVTEDRKGDGLVLEEDIKKNIS--LANLGGVSERTVIDEAREYKI 386 DLS ++A K I V +D + D + + L GV+ T ++ R I Sbjct: 373 DLSDAQQRAERKRIQVVFQDP-----LASFDPRYTVERVLFEALGVAGYTDTEKTRARAI 427 Query: 387 AADFKQQMRIRCSSVLQKVVNLSGGNQQKVVLSKWLFSQPEVLILDEPTRGIDVGAKFEI 446 + +R+ S + ++ + LSGG +Q++ +++ L +PEVLI DEP +DV + +I Sbjct: 428 --ELLHLVRLDQSYLQRRPIELSGGQRQRIAIARALAPEPEVLICDEPVSALDVSVQAQI 485 Query: 447 YNIISKLAAE-GKCIIMISSEMPELLGMCDRIYVMNEG 483 +++ L G + IS ++ + + DRI VM +G Sbjct: 486 LDLLIDLKDRLGLSCLFISHDLGVIYRVSDRILVMKDG 523 Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 146/263 (55%), Gaps = 27/263 (10%) Query: 4 ILEMRGIEKSFPGVK-----ALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGS 58 ++E+ + K F G A++ V+ A+R+GE IVGE+G+GK+TL +++ G+ Sbjct: 302 VVEVNNLTKVFFGPDGSRRVAVSEVSFALRKGETVGIVGESGSGKTTLTRMVLGL--ETP 359 Query: 59 YSGDIVYKGEVRAFKDIRDSEHLG----IIIIHQE--LALVPLLSVMENLFLGNEQARG- 111 G++ + +V + D+ D++ I ++ Q+ + P +V LF +A G Sbjct: 360 NVGNVRLRDQV--WSDLSDAQQRAERKRIQVVFQDPLASFDPRYTVERVLF----EALGV 413 Query: 112 -GVIDWEQSYVRAKELLAKVGLKESP-QALVGDLGVGKQQLIEIAKALSKEVKLLILDEP 169 G D E++ RA ELL V L +S Q +L G++Q I IA+AL+ E ++LI DEP Sbjct: 414 AGYTDTEKTRARAIELLHLVRLDQSYLQRRPIELSGGQRQRIAIARALAPEPEVLICDEP 473 Query: 170 TASLNESDSDALLELLLELK-RQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRA 228 ++L+ S +L+LL++LK R G++ + ISH L I +V+D I V++DG V++ R Sbjct: 474 VSALDVSVQAQILDLLIDLKDRLGLSCLFISHDLGVIYRVSDRILVMKDGIVVESGGVRE 533 Query: 229 EPISEDRIIQHMVGREMADRYPQ 251 + E+ QH+ + + PQ Sbjct: 534 --VFENP--QHIYTQTLLSAIPQ 552 >gi|152980136|ref|YP_001354236.1| ABC-type branched-chain amino acid transport system ATP-binding protein [Janthinobacterium sp. Marseille] Length = 256 Score = 108 bits (270), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 14/230 (6%) Query: 4 ILEMRGIEKSFPGVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGSYSGDI 63 IL + G+ K F G++AL++VN+ + +G+I+ ++G NGAGK+T V++G+Y + +G Sbjct: 6 ILNIAGVSKRFGGLQALSDVNIKIMQGQIYGLIGPNGAGKTTFFNVITGLYQ--ADTGSF 63 Query: 64 VYKGEVRAFKDIRDSEHLGIIIIHQELALVPLLSVMENLFLG----NEQARGGVIDWEQS 119 G+ + GI Q + L ++ +EN+ +G Q G + ++ Sbjct: 64 ELAGKPYSPSAPHKVAKAGIARTFQNIRLFGEMTALENVMIGRHVRTHQGLFGAVFHHKA 123 Query: 120 Y--------VRAKELLAKVGLKESPQALVGDLGVGKQQLIEIAKALSKEVKLLILDEPTA 171 RA ELL VG+ + + L G Q+ +EIA+AL+ + +LL LDEP A Sbjct: 124 ARREEAEIRQRAMELLEFVGIAKFAERTARHLSYGDQRRLEIARALATDPQLLALDEPAA 183 Query: 172 SLNESDSDALLELLLELKRQGIASILISHKLNEISKVADSITVLRDGTTV 221 +N ++ L ELL+++K +G +LI H + + + D ITVL G + Sbjct: 184 GMNATEKLGLRELLVKIKAEGKTILLIEHDVKLMMGLCDRITVLDYGKPI 233 Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 22/220 (10%) Query: 278 AIKDVNMTVRAGEIVGIAGLMGAGRTELAKSIFGRAYGKKITGQAFLHGKEVDLSTIEKA 337 A+ DVN+ + G+I G+ G GAG+T I G TG L GK S K Sbjct: 21 ALSDVNIKIMQGQIYGLIGPNGAGKTTFFNVITGLYQAD--TGSFELAGKPYSPSAPHKV 78 Query: 338 IAKGIAYVTEDRKGDGLVLEEDIKKNISLANLGGVSERT---VIDEAREYKIAADFKQQM 394 GIA ++ + L E +N+ + G RT + +K A + ++ Sbjct: 79 AKAGIARTFQNIR---LFGEMTALENVMI----GRHVRTHQGLFGAVFHHKAARREEAEI 131 Query: 395 RIRCSSVLQKV----------VNLSGGNQQKVVLSKWLFSQPEVLILDEPTRGIDVGAKF 444 R R +L+ V +LS G+Q+++ +++ L + P++L LDEP G++ K Sbjct: 132 RQRAMELLEFVGIAKFAERTARHLSYGDQRRLEIARALATDPQLLALDEPAAGMNATEKL 191 Query: 445 EIYNIISKLAAEGKCIIMISSEMPELLGMCDRIYVMNEGQ 484 + ++ K+ AEGK I++I ++ ++G+CDRI V++ G+ Sbjct: 192 GLRELLVKIKAEGKTILLIEHDVKLMMGLCDRITVLDYGK 231 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.136 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,120,701 Number of extensions: 46715 Number of successful extensions: 498 Number of sequences better than 1.0e-08: 57 Number of HSP's gapped: 402 Number of HSP's successfully gapped: 95 Length of query: 518 Length of database: 1,221,021 Length adjustment: 87 Effective length of query: 431 Effective length of database: 899,382 Effective search space: 387633642 Effective search space used: 387633642 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)