BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0776.p
         (196 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981309|ref|YP_001354351.1| hypothetical protein mma_2661 [...   246   5e-67

>gi|152981309|ref|YP_001354351.1| hypothetical protein mma_2661
           [Janthinobacterium sp. Marseille]
          Length = 194

 Score =  246 bits (629), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 116/182 (63%), Positives = 145/182 (79%)

Query: 15  NEVVALTRAWLEQAVIGLNLCPFAKSVHVKDQVRYHVSRHQDWDSLAAELEEELCFLAKA 74
           +E++ALT+AWLE+AVIGLNLCPFAK+V+VK Q+RY VS+    D+L  EL+ EL +L  +
Sbjct: 11  DEIIALTQAWLEKAVIGLNLCPFAKAVYVKQQIRYVVSKADTTDALLTELKAELQYLQDS 70

Query: 75  DPEQVDTTLFIIPLALAEFLEYNDFLDWADRILERLELDGELQIASFHPHYQFADAQADD 134
           DP +VDTTL I+P  LA+FL+YNDFLD AD  +E LELDGE+QIASFHP YQFA  + DD
Sbjct: 71  DPVKVDTTLLILPEVLADFLDYNDFLDTADEAIEDLELDGEIQIASFHPDYQFAGTKTDD 130

Query: 135 IENYSNRSPFPILHLLRESSIDRAVAAYPDAAAIFEKNMVTLRKLGLTGWNMLPFVVSKE 194
           IENY+NRSP+PILHLLRE+SI+RAV A+P+A  I+EKNM TLRKLGL GW  L  +    
Sbjct: 131 IENYTNRSPYPILHLLREASIERAVEAFPEAEEIYEKNMETLRKLGLQGWTNLQLLAPPR 190

Query: 195 QR 196
           +R
Sbjct: 191 ER 192


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 382,289
Number of extensions: 12069
Number of successful extensions: 36
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 1,221,021
Length adjustment: 78
Effective length of query: 118
Effective length of database: 932,655
Effective search space: 110053290
Effective search space used: 110053290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)