BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0773.p
         (656 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152983083|ref|YP_001353398.1| hypothetical protein mma_1708 [...   202   6e-53
gi|152983082|ref|YP_001353397.1| hypothetical protein mma_1707 [...   193   3e-50

>gi|152983083|ref|YP_001353398.1| hypothetical protein mma_1708
           [Janthinobacterium sp. Marseille]
          Length = 484

 Score =  202 bits (513), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 162/493 (32%), Positives = 250/493 (50%), Gaps = 32/493 (6%)

Query: 158 VEEQFYLFWPLLLWAAWKRRRTMLATLLTVMLLSFGWNVVSVHQDAVAAFYLPMSRFWEL 217
           VEEQFYL WPL++W  +KR+ ++ A +  ++  SF   + ++     A+F+LP++R WEL
Sbjct: 3   VEEQFYLVWPLVVWFVYKRKFSLFAIISILLAASFLLGIATIKSHPAASFFLPVTRLWEL 62

Query: 218 GAGALLAYWRGRSAPVQGSV-ANWFSAIGLLLIILAIAVITKQDLFPGWWAALPVAGAFL 276
            AGA LAY   +   ++G    N  S +GL L+   I  ++    FPG    +PV GA  
Sbjct: 63  LAGAALAYLSVQGRQIKGETYQNLVSLVGLFLLSYGIFRLSATG-FPGVKGLVPVIGALC 121

Query: 277 LLAAGPQASVNRTLLSHRTMVWLGLISYPLYLWHWPLLAFARLLAGDTPPVDVRLGVVVL 336
           L+AAGP A +NR +L  R  V +GLISYPLYLWHWPLL+FAR+L   TP   +R  +V +
Sbjct: 122 LIAAGPGAWLNRHILGSRLFVGIGLISYPLYLWHWPLLSFARILEAGTPSPAIRAAIVGI 181

Query: 337 AMVLAWFTYRLLEVPVRLRASGRKVAVTLVLLMLLMAALGWFVVKRNGMEFRNMGALAML 396
           + +LA  T+ LLE P++  A+ R + +  + L+L + A G  +  ++G+  R        
Sbjct: 182 SFILAILTFLLLERPLKRIAATRLMPIL-LTLLLSVGATGALIYWKDGVASR-------F 233

Query: 397 FNDQVRQTAALNHF-ELPHPSCASLMGKEHSRDWCTAPVSSAPPQVLLIGDSYSGAYAPM 455
            NDQ       ++F  L    C    GKE S+   T   ++  P V + GDS++      
Sbjct: 234 ANDQNALFVRGDYFGGLDIRDC----GKEFSKVASTHCRTTDSPTVAIFGDSHTAHL--- 286

Query: 456 LARLYETSPQPQLVFRQFARGGC---ASLLNYSSGYCLEIAERLAQYARDTPSIQTVVLA 512
               Y  + QP+        GG    A  +    G C +  E   +    TP+IQTV+L 
Sbjct: 287 ---FYGMAIQPRDNAVMMLLGGACPPAKGVEVRPG-CTQQYEDALRMIASTPTIQTVILV 342

Query: 513 ANWP-GQFAADQSDILRALEQTILYYRQLGKRVVVLLSPPN-GANPKSCVLRGVHLSDA- 569
           A +      A +  +L    QTI   +  GK+V+ L   P    + ++C  R V LS   
Sbjct: 343 AYYAYSDDEAMRKKMLAGYRQTIADLK--GKKVIFLADTPTLKVSAETCFTRPVRLSSHA 400

Query: 570 -DFCNLPLAKAEQMDDHYREQLLPLLQRLQ-VPVFDPFPTLCDQHGCKVIDGLRILYFDP 627
            + C+LP +  +     Y + +  + +  Q V VFDP P  C+   C+ +   ++ Y D 
Sbjct: 401 LEKCDLPKSAFDSSRVIYNDFVKSIGEENQSVRVFDPTPLFCNTQVCEAVHDGKLQYTDN 460

Query: 628 GHLSQYGAQFLAD 640
            HLS+ G + LA+
Sbjct: 461 NHLSRDGGRRLAE 473


>gi|152983082|ref|YP_001353397.1| hypothetical protein mma_1707
           [Janthinobacterium sp. Marseille]
          Length = 232

 Score =  193 bits (491), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 91/139 (65%), Positives = 108/139 (77%)

Query: 18  SHAPYRRDIDGLRAIAVLCVVVFHAFPECLPGGFVGVDIFFVISGFLISGILFDALQRGH 77
           SH  YR DIDGLRA+A+L VV+FHAFP+ + GGFVGVDIFFVISGFLIS I+   +  G 
Sbjct: 54  SHIKYRPDIDGLRAVAILPVVIFHAFPQYVIGGFVGVDIFFVISGFLISSIIIKEINEGK 113

Query: 78  FNIIDFYIRRVRRIFPALLLVMLVCLLAGWFILLPQEYRQLGKHILGGAGFVSNIVLWSE 137
           F    FY RR++RIFPAL+L++  CL AGW  L+P E+  LGKH+L GAGFVSN VL SE
Sbjct: 114 FTFQQFYARRIKRIFPALILILTTCLAAGWIALMPNEFDSLGKHVLSGAGFVSNFVLLSE 173

Query: 138 AGYFDTSAETKPLLHLWSL 156
            GYFD++AE KPLLHLWSL
Sbjct: 174 LGYFDSAAEFKPLLHLWSL 192


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.328    0.141    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,513,662
Number of extensions: 59947
Number of successful extensions: 251
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 247
Number of HSP's successfully gapped: 2
Length of query: 656
Length of database: 1,221,021
Length adjustment: 89
Effective length of query: 567
Effective length of database: 891,988
Effective search space: 505757196
Effective search space used: 505757196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 133 (55.8 bits)