BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0765.p
         (405 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982863|ref|YP_001355300.1| hypothetical protein mma_3610 [...   120   2e-28
gi|152983033|ref|YP_001352592.1| hypothetical protein mma_0902 [...   118   5e-28

>gi|152982863|ref|YP_001355300.1| hypothetical protein mma_3610
           [Janthinobacterium sp. Marseille]
          Length = 194

 Score =  120 bits (301), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 172 LGRTLGLDETACREAGLGGFLHDVGKAFLPQEVLNKPGRLTDEEFSQIKKHPELGYKYLS 231
            GR +GL ET     G+G  +HD+GK  + + VLNKP RLT  EF  IK+HP  GY+ L+
Sbjct: 42  FGRYIGLSETESSLLGIGAGIHDIGKLCINEHVLNKPSRLTSAEFFFIKQHPMAGYQLLA 101

Query: 232 QDPNVPDYARDVCLHHHEKMDGTGYPESLRAGNISLYSRMAAICDVYDALTSDRPYKRAW 291
               +     D  LHHHE  DG+GYP  L   NI L++R+  I D YDA+T +RPY +  
Sbjct: 102 P-LELDTRVTDCVLHHHENFDGSGYPHGLAGENIPLFARIVRIWDSYDAITMNRPYHKGR 160

Query: 292 DPAEAISSMATWTGHFDRAMFLAF 315
            P+EA++ +      +D A+  +F
Sbjct: 161 SPSEALALLEKDKALYDPALLASF 184


>gi|152983033|ref|YP_001352592.1| hypothetical protein mma_0902
           [Janthinobacterium sp. Marseille]
          Length = 291

 Score =  118 bits (296), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 2/163 (1%)

Query: 155 DEYTYLHSVAVCALMVALGRTLGLDETACREAGLGGFLHDVGKAFLPQEVLNKPGRLTDE 214
           D YT  H   V      L   LG+ ET      +GGFLHD+GK  +P ++LNK  +L++E
Sbjct: 37  DPYTGGHLWRVSRFAHRLALELGMSETDAARIAIGGFLHDLGKVGIPDQILNKKDKLSEE 96

Query: 215 EFSQIKKHPELGYKYLSQDPNVPDYARDVCLHHHEKMDGTGYPESLRAGNISLYSRMAAI 274
           E+  I+ HPE+G++ L+  P +   A      HHE  DG GYP  +R  +I + +R+  I
Sbjct: 97  EYDVIRTHPEIGWRMLANHP-LAHIAEHAIRFHHETPDGKGYPTGIRGTDIPVEARIVGI 155

Query: 275 CDVYDALTSDRPYKRAWDPAEAISSMATWTG-HFDRAMFLAFV 316
           CD +DA+TS RPY++     +A+S + +  G  FD  +   FV
Sbjct: 156 CDAFDAMTSTRPYRKGMPIEKALSIIESELGRQFDSIIGAKFV 198


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 914,364
Number of extensions: 35967
Number of successful extensions: 100
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 2
Length of query: 405
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 320
Effective length of database: 906,776
Effective search space: 290168320
Effective search space used: 290168320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)