BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0752.p (419 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981572|ref|YP_001351941.1| acyl-CoA dehydrogenase family p... 319 2e-88 gi|152981725|ref|YP_001351956.1| hypothetical protein mma_0266 [... 155 4e-39 gi|152981648|ref|YP_001354310.1| FMNH2-dependent monooxygenase [... 142 5e-35 >gi|152981572|ref|YP_001351941.1| acyl-CoA dehydrogenase family protein [Janthinobacterium sp. Marseille] Length = 437 Score = 319 bits (817), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/386 (44%), Positives = 238/386 (61%), Gaps = 3/386 (0%) Query: 31 VIRDDAEAIAVAHTLAQRLAEGASERDRLRRWPVEEIEAYSQSGLWAINVPRAFGGAEVS 90 +IR D EA+A A LA A+ AS RDR RR P E++ +QSGLW I VP+ GGA VS Sbjct: 17 LIRSDEEALATAQVLADEFAQEASVRDRERRLPFAELKKITQSGLWGITVPKEHGGAGVS 76 Query: 91 YATLAEVIAIIAAADPSLAQITQNHLGFVAAVRTVSDAEQQQRFFADFLRGVRWGNAFSE 150 Y TLA++ AI + AD S+ QI QNH + +R EQ++ FF L G +GNA E Sbjct: 77 YVTLAQIFAIFSRADGSIGQIPQNHYFVIELIREHGTEEQKKFFFERILAGDHFGNALVE 136 Query: 151 SGSKRAADFE-TRFVDAGDHVIVTGKKFYSTGALLAHYVPIVANDEENRTWYV-VADRNA 208 +K+ D + + F D +H T +K+Y+TG+L A ++P N E+ ++ R+A Sbjct: 137 LNAKKPEDRKVSLFADGDEHYRATVRKYYATGSLYADWIPTALNSEDKEEHHLAFFSRHA 196 Query: 209 PGLTVIDDWSAFGQRTTLSGTVIIDQVKVPKSQLIPAYKGYQEPSADGAIFQIIQAAIDV 268 GLT+IDDW+ GQRTT SG+VI+D ++ K+ ++ + + S G QI+ AAID Sbjct: 197 EGLTIIDDWAGLGQRTTASGSVILDNARIAKNLVVSHREKKEHVSPVGPTGQIMHAAIDT 256 Query: 269 GIARAAIADTQEFVRTKSRPWIDSQRDHAWE-DPYSIQAVGDLQIRLHASDALLERAGRA 327 GIARAA T F+R ++ D+ D +WE D +I+ +GDL + LH ++ALLERAGR Sbjct: 257 GIARAAFEATIAFIRGRNPKKPDAAPDASWEEDQLTIREIGDLSVALHGAEALLERAGRI 316 Query: 328 IDAAVAAPDAESVARAQILTAEAKVLSTEIAIHATNKLFELAGTRSTLGQYNLDRHWRNA 387 ID A +A I +E + ST A+ TNKLFE +GT++T ++NLDR+WR+A Sbjct: 317 IDHAYVTGLQTDWTKASIAVSEVRAASTHAALLITNKLFEFSGTQATASKHNLDRYWRDA 376 Query: 388 RTHTLHDPVRWKYALIGNYYLNGVKP 413 RTHTLHDPVRW+ +GNYYLN P Sbjct: 377 RTHTLHDPVRWRLYDVGNYYLNDKVP 402 >gi|152981725|ref|YP_001351956.1| hypothetical protein mma_0266 [Janthinobacterium sp. Marseille] Length = 425 Score = 155 bits (392), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 114/395 (28%), Positives = 181/395 (45%), Gaps = 10/395 (2%) Query: 26 TQPAHVIRDDAEAIAVAHTLAQRLAEGASERDRLRRWPVEEIEAYSQSGLWAINVPRAFG 85 T+P V E A + R+AE A R++ R P E + ++G + +P +G Sbjct: 12 TKPVAVAPTYEELAARFRPIFARIAEDAVRREQERELPYEAVRWLREAGFGRVRIPLKYG 71 Query: 86 GAEVSYATLAEVIAIIAAADPSLAQITQNHLGFVAAVRTVSDAEQQQRFFADFLRGVRWG 145 G + + ++ +A AD +++ + + H F+ + +D ++ +F + G G Sbjct: 72 GFGATISQFFRLLVELAEADSNVSHLLRGHFAFLESRINHTDESVREFWFPKIVEGSLIG 131 Query: 146 NAFSESGSKRAADFETRFVDAGDHVIVTGKKFYSTGALLAHYVPIVANDEENRTWYVVAD 205 A +E + D + GKK+YSTG + A ++ D E R V Sbjct: 132 YAMAELTAVTGTSATITQQDG--KWFLNGKKYYSTGTIYADWIVASVVDGEERV-SVSLP 188 Query: 206 RNAPGLTVIDDWSAFGQRTTLSGTVIIDQVKVPKSQLIPAYKGYQE--PSADGAIFQIIQ 263 APG+T IDDW FGQR T SGT + +QV++ + G S A Q+I Sbjct: 189 ATAPGVTRIDDWDGFGQRMTGSGTTVFEQVEILPEHINRRLTGKDSYAQSYQKAFLQLIL 248 Query: 264 AAIDVGIARAAIADTQEFVRTKSRPWIDSQRDHAWEDPYSIQAVGDLQIRLHASDALLER 323 A G+ RA D FV+ K+R + DP + VG L A+D ++E Sbjct: 249 LASIAGVGRAVKRDGIAFVQRKTRAFGVLGESSPRHDPLVQRVVGRLASLSFAADTIVEG 308 Query: 324 AGRAIDAAVAAPDAESVARA-----QILTAEAKVLSTEIAIHATNKLFELAGTRSTLGQY 378 R +D A A++ A +I +A+ + ++ + A+ LFE+ G +T Sbjct: 309 IARTLDEVHQARLADTADEALYVDTEIKAFQAQQIVIDLVLQASTLLFEVGGASATSESR 368 Query: 379 NLDRHWRNARTHTLHDPVRWKYALIGNYYLNGVKP 413 LDRHWRNART H+P ++ IG+YYLNG P Sbjct: 369 RLDRHWRNARTAASHNPAIFRERAIGDYYLNGTVP 403 >gi|152981648|ref|YP_001354310.1| FMNH2-dependent monooxygenase [Janthinobacterium sp. Marseille] Length = 417 Score = 142 bits (357), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 116/369 (31%), Positives = 179/369 (48%), Gaps = 12/369 (3%) Query: 55 ERDRLRRWPVEEIEAYSQSGLWAINVPRAFGGAEVSYATLAEVIAIIAAADPSLAQITQN 114 ERDR E + SGL + VP AFGG E + T+ ++I A D SLA + Sbjct: 45 ERDRSGGTAWTERQVLRDSGLLKLAVPAAFGGPETPWPTIYKIIRRFAEVDSSLAHLFGF 104 Query: 115 HLGFVAAVRTVSDAEQQQRFFADFL-RGVRWGNAFSESGSKRAADFETRFVDAGDHVIVT 173 VA+V + EQ+ + + WGNA + ++ + H + Sbjct: 105 QHLQVASVALFGNPEQKAFYLGKTVSENWFWGNATNGLDTRATLVWRDGKDGTDGHYELN 164 Query: 174 GKKFYSTGALLAHYVPIVA---NDEENRTWYVV-ADRNAPGLTVIDDWSAFGQRTTLSGT 229 G K + +GA + + I A D +R + + DR+ G+ V+DDW GQR T SG+ Sbjct: 165 GIKSFCSGATGSDMLNITAPRSADPADRVFLSIPTDRS--GVKVLDDWDNLGQRQTDSGS 222 Query: 230 VIIDQVKVPKSQLI--PAYKGYQEPSADGAIFQIIQAAIDVGIARAAIADTQEFVRTKSR 287 V D+V+V +++ P G + + Q+I I +G A+ A+ + ++ + R Sbjct: 223 VTFDKVRVEAHEVLGPPGTSGTPRATLRTLVSQLILIEIYIGNAQGALLNAWQYTHEQGR 282 Query: 288 PWIDSQRDHAWEDPYSIQAVGDLQIRLHASDALLERAGRAIDAAVAAPDAESVA-RAQIL 346 PW S A +DP++ Q GDL+I L A+ AL E A + A DA + A R ++ Sbjct: 283 PWFTSGVARAIDDPFTQQHYGDLRIALRAAIALAEDAAARLQKAWERGDALTAAERGELA 342 Query: 347 TA--EAKVLSTEIAIHATNKLFELAGTRSTLGQYNLDRHWRNARTHTLHDPVRWKYALIG 404 A E K+ + A+ T K+FE+ G R+T +Y DR WRN R HTLHD + +K +G Sbjct: 343 VAIYETKIAAARAALDITAKIFEVMGARATAAKYGFDRFWRNVRVHTLHDSLDYKLKDVG 402 Query: 405 NYYLNGVKP 413 + L G P Sbjct: 403 QWVLTGEVP 411 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.131 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 955,038 Number of extensions: 38345 Number of successful extensions: 121 Number of sequences better than 1.0e-08: 3 Number of HSP's gapped: 110 Number of HSP's successfully gapped: 3 Length of query: 419 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 333 Effective length of database: 903,079 Effective search space: 300725307 Effective search space used: 300725307 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)