BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0747.p (402 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152983073|ref|YP_001352712.1| alkanesulfonate monooxygenase [... 124 1e-29 gi|152981361|ref|YP_001352430.1| alkanesulfonate monooxygenase [... 108 6e-25 gi|152981477|ref|YP_001351940.1| DszA family monooxygenase [Jant... 71 1e-13 gi|152981454|ref|YP_001355156.1| xenobiotic compound monooxygena... 57 2e-09 >gi|152983073|ref|YP_001352712.1| alkanesulfonate monooxygenase [Janthinobacterium sp. Marseille] Length = 375 Score = 124 bits (310), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/363 (28%), Positives = 170/363 (46%), Gaps = 40/363 (11%) Query: 32 VKFAYWVPNVSGGLVVSKIPQRTEWSLEYNQRLAVAAEKAGFEYALSQIRFTAGYGAEYQ 91 ++ +++P G + E +L Y +++A+A+E+ GF S + +G G + Sbjct: 1 MELFWFLPTYGDGRFLGTAVGSREATLGYLKQVALASEELGF----SGVLVPSGKGCD-- 54 Query: 92 HESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHISNGRIAINVVSGWFKGE 151 ++ + L T +LK L A+ PG PA A+ + +D S+GR+ +NVV+G E Sbjct: 55 -DAWIVASNLAAITQRLKFLIALRPGIIAPAAAARMASALDRFSDGRLLLNVVTGGDPVE 113 Query: 152 FQAIGEPWLEHDERYRRSHEFIQALKGIWTQDDFTFKGDFYRFNNYTLSPKPVQKPHPEI 211 G L H ERY ++ EF+ + ++T+ T KG ++ + L QKP+P + Sbjct: 114 LAGDGL-HLSHSERYVQTDEFLTVFRRLFTEASVTHKGPYFHLTDGELLQPSRQKPYPPL 172 Query: 212 FQGGSSRAARDNAASVSDWYFTNGNTVEALKAQIDDIQAKAAQNGHKVRIGVNAFVIARD 271 F GGSS AA + A D Y T G ++ +I DI+ KA + G +V+ G+ + R Sbjct: 173 FLGGSSAAAHEITAKHIDVYLTWGEPPAQVEEKIADIRMKAEKLGRQVKFGIRLHTVVRQ 232 Query: 272 TEEEAQAVLEDIIKHAHVEAVHAFGDAVKQAGKASPEGEGN------------------- 312 ++A D++KH + + A QA A + EG Sbjct: 233 NADDAWTAANDLLKHVDDDTI-----AKAQATLARFDSEGQKRLLELHGGSRDKLEVSPN 287 Query: 313 -WAKSSFEDLVQYNDGFKTNLIGTPQQIAERIVALKAVGVD-LVLTGFLHFIEEVEYFGQ 370 WA S G T L+G +Q+A RI+ A+G+D +L+G H +EE +F + Sbjct: 288 LWAGISL-----VRGGVGTALVGNGEQVAARILEYAALGIDYFILSGIPH-LEEAYHFHE 341 Query: 371 KVL 373 V Sbjct: 342 NVF 344 >gi|152981361|ref|YP_001352430.1| alkanesulfonate monooxygenase [Janthinobacterium sp. Marseille] Length = 384 Score = 108 bits (270), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 38/355 (10%) Query: 58 LEYNQRLAVAAEKAGFEYALSQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAILPG 117 +Y +++AV+A+ G++ L G E ++ + +L+ T +LK L A+ PG Sbjct: 29 FDYLKQVAVSADTLGYDGVL----LPTGRSCE---DAWVAASSLIGETKQLKFLVAVRPG 81 Query: 118 PWHPAVVAKQIATIDHISNGRIAINVVSGWFKGEFQAIGEPWLEHDERYRRSHEFIQ--- 174 P + + AT D +S GR+ INVV+G + E +A G H ERY + EF++ Sbjct: 82 LSTPGLAVRMAATFDRLSKGRLLINVVTGGDQAELEADG-LHASHSERYEITDEFLKVWR 140 Query: 175 -ALKGIWTQDDFTFKGDFYRFNNYTLSPKPVQKPHPEIFQGGSSRAARDNAASVSDWYFT 233 +L G + F+G + PVQ+P+P ++ GGSS AA + AA D Y T Sbjct: 141 ASLSGEGGDAGYDFEGKHIQVKGAKTLYPPVQQPYPPLYFGGSSPAAHELAAEQVDVYLT 200 Query: 234 NGNTVEALKAQIDDIQAKAAQNGHKVRIGVNAFVIARDTEEEAQAVLEDIIKHAHVEAVH 293 G A+ +I D++A+AA++G ++ G+ VI R+T EEA +++IK+ + + Sbjct: 201 WGEPPAAVAEKIADMRARAAKHGRILKFGIRLHVIVRETNEEAWKAADELIKYVDDDLI- 259 Query: 294 AFGDAVKQAG--KASPEGEGNWA------KSSFE---------DLVQYNDGFKTNLIGTP 336 A QA K EG+ A K E LV+ G T L+G Sbjct: 260 ----ARAQASFNKMDSEGQRRMAALHGGKKDKLEVSPNLWAGVGLVRGGAG--TALVGDA 313 Query: 337 QQIAERIVALKAVGVD-LVLTGFLHFIEEVEYFGQKVLPLVRELEARQAAGTAQG 390 + +A R+ +G++ +L+G+ H +EE F + V PL+ + +AR G Sbjct: 314 ETVAARMQEYADLGIETFILSGYPH-LEESYRFAELVFPLLGKGKARSGEAVLTG 367 >gi|152981477|ref|YP_001351940.1| DszA family monooxygenase [Janthinobacterium sp. Marseille] Length = 449 Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 30/200 (15%) Query: 120 HPAVVAKQIATIDHISNGRIAINVVSGWFKGEFQAIG-EPWLEHDERYRRSHEFIQA--- 175 P + A+++AT+DH+SNGR+ N+V+G+ +A+G + ++HD+RY R +F++ Sbjct: 100 QPYLFARRLATLDHLSNGRVGWNIVTGYLDSAARAMGLKQQIDHDDRYERGDDFMEVFYK 159 Query: 176 -LKGIWTQDDFTFK-------------------GDFYRFNN-YTLSPKPVQKPHPEIFQG 214 L+G W +DD + G +Y+ + Y L+ +Q+ P ++Q Sbjct: 160 LLEGSW-EDDAVVRDKVRGMYADPKKIHRIHHDGPYYKVDGVYNLTEPSLQRT-PVLYQA 217 Query: 215 GSSRAARDNAASVSDWYFTNGNTVEALKAQIDDIQAKAAQNGHK---VRIGVNAFVIARD 271 G+S+ + AA ++ FT E L I +I+ A G + + + V+ Sbjct: 218 GASQRGNEFAAKHAECVFTGAPNRELLAKGIANIRRLAVDAGRQPNDILVFSGLTVVVDS 277 Query: 272 TEEEAQAVLEDIIKHAHVEA 291 E+ A+ ED ++A E Sbjct: 278 NEKAAREKYEDYKQYASAEG 297 >gi|152981454|ref|YP_001355156.1| xenobiotic compound monooxygenase A subunit [Janthinobacterium sp. Marseille] Length = 436 Score = 56.6 bits (135), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 42/259 (16%) Query: 58 LEYNQRLAVAAEKAGFEYAL--SQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAIL 115 L+Y R+A E+ F+ ++ + YG ++++ VS L VL A+ Sbjct: 34 LDYYARIAQTLERGKFDLLFFADRLAVSTRYGGDHRY-GVSHGDQDATRLDPLPVLGALA 92 Query: 116 PGPWH-------------PAVVAKQIATIDHISNGRIAINVVSGWFKGEFQAIG-EPWLE 161 H P +A++ +T+DH+S+GR A NVV+ +GE G L Sbjct: 93 AVTSHIGLGATRSTTYSQPYSLAREFSTLDHLSSGRAAWNVVTSVNQGEADNFGLRETLG 152 Query: 162 HDERYRRSHEFIQA---LKGIWTQDDF---TFKGDFYRFN---------NYTLSPKPVQK 206 HDERY R+ EF++ L G W D T KG + + Y P+ Sbjct: 153 HDERYDRADEFLEVAHKLWGSWAPDALQLETAKGQYANADLVNPIAYEGKYFNVTGPLNI 212 Query: 207 PH-----PEIFQGGSSRAARDNAASVSDWYFTNGNTVEALKAQIDDIQAKAAQNGH---- 257 P P I Q GSS +D AA ++ F + ++ D++ +A + G Sbjct: 213 PSSPQGGPVIIQAGSSHRGQDFAARWAEVVFGIQPDLPRMQRFYQDLKGRAEKFGRSPKD 272 Query: 258 -KVRIGVNAFVIARDTEEE 275 KV + FV E E Sbjct: 273 IKVLTALMPFVGKTRAEAE 291 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.316 0.130 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 887,409 Number of extensions: 36207 Number of successful extensions: 136 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 130 Number of HSP's successfully gapped: 4 Length of query: 402 Length of database: 1,221,021 Length adjustment: 85 Effective length of query: 317 Effective length of database: 906,776 Effective search space: 287447992 Effective search space used: 287447992 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 130 (54.7 bits)