BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0743.p (735 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982931|ref|YP_001353404.1| cation-translocating P-type ATP... 270 3e-73 gi|152981047|ref|YP_001353486.1| cation-translocating P-type ATP... 246 4e-66 gi|152980975|ref|YP_001355215.1| cation-translocating P-type ATP... 243 2e-65 gi|152981057|ref|YP_001353319.1| cation-translocating P-type ATP... 239 3e-64 gi|152981280|ref|YP_001353512.1| K+-transporting ATPase B chain ... 129 4e-31 >gi|152982931|ref|YP_001353404.1| cation-translocating P-type ATPase [Janthinobacterium sp. Marseille] Length = 789 Score = 270 bits (689), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 195/547 (35%), Positives = 297/547 (54%), Gaps = 28/547 (5%) Query: 55 AAVIALMFVTGRALENHAERRAQQDMSALLAKVPQRAHRY-ENGRIVEVALAQIRPGDRL 113 AAVI + + G+ LE A + + +LL P+ A R ++G +V LA + D L Sbjct: 244 AAVIISLTLLGQILELKARSQTSAAIKSLLGLAPKTARRINKDGSEEDVPLAHVHVDDSL 303 Query: 114 LVRSGETVPVDGTLL-GAAVVDQSTLSGESLPLSCAQGAFLPSGSINAGEAFELLASSTA 172 VR GE VPVDG ++ G + +D+S L+GE +P++ G + ++N + + + Sbjct: 304 RVRPGEKVPVDGVVVEGESAIDESMLTGEPMPVTKRPGDKVIGATLNTSGSLVIRSEKIG 363 Query: 173 EQGTLGHIVRLVHSAQQSRAPAARLADRYALWFVPVALGLAAL---AWLLSG-EPE---- 224 Q L IV++V AQ+SRAP RLAD A +FV V +G+A L W + G +P Sbjct: 364 SQTMLAQIVQMVAQAQRSRAPMQRLADVVAGYFVLVVVGVAFLTFIGWGMFGPDPSWVFG 423 Query: 225 --RALAVAVVATPCPLILAVPVALVCAMSRCAQRGVLIKHGGALEKLAHLHTLFLDKTGT 282 A+AV ++A PC L LA P++++ A R A +G+L + A+E + ++TL +DKTGT Sbjct: 424 FVNAVAVLIIACPCALGLATPMSIMAATGRAATQGMLFRDAAAIEGMRKVNTLIVDKTGT 483 Query: 283 LTSGKARLTAIDVAPGMEPHDLLRLAASLEQLSAHAIAQAVVAAALARGLPLALPEQVSE 342 LT GK + A G E +L++AAS++Q S H +A A+VA A RGL L PE Sbjct: 484 LTEGKPAFDRVIAAQGQEEQFVLQIAASIDQGSEHPLAHAIVAEARQRGLSLDKPESFES 543 Query: 343 QPGAGLTGQVDGRQVRVGTRDFVLGLDALPDWA--VHPGARIGYEGTAGVYLALDGHLAG 400 G G+ G V GR++ +G + L + DW + EG + +Y+A+DG LAG Sbjct: 544 SSGIGVRGIVSGRRIALG--NTALMDEEKIDWHGLSQQAEALRKEGASVIYVAVDGKLAG 601 Query: 401 VMQLADQVRLETPRALRLLRTLGAQRIVMLTGDHREVATTIGHALGVDDILSEQTPASKL 460 ++ ++D ++ T AL +LR G ++M TGD A ++ L + + E P KL Sbjct: 602 LIAVSDPIKKTTAEALTILREAG-MTVIMATGDGATTAKSVARKLDISEFYGEVKPQDKL 660 Query: 461 EAIRQARQQG-VTMMVGDGVNDAPALAAADVGVAMGARGAAAAAESAQVVLLVDRLDRLA 519 + + +++G V M GDG+NDAPALA ADVG+AMG G A SA + L+ L +A Sbjct: 661 ALVERLQKEGRVVAMAGDGINDAPALAKADVGIAMGT-GTDVAINSAHLTLIKGDLRAIA 719 Query: 520 FAVRLAQQTRRIALQSVVAGMGLSLLAMVVAALGYLPPVAGAVLQELI--------DVAV 571 A +L+ T R Q++ + L + +AA G L P G +L +I V+V Sbjct: 720 RARQLSLDTVRNMHQNLGFAFIYNSLGIPLAA-GLLYPFTGQLLSPMIAALAMSLSSVSV 778 Query: 572 ILNALRV 578 I NALR+ Sbjct: 779 ITNALRL 785 >gi|152981047|ref|YP_001353486.1| cation-translocating P-type ATPase [Janthinobacterium sp. Marseille] Length = 742 Score = 246 bits (628), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 189/575 (32%), Positives = 305/575 (53%), Gaps = 37/575 (6%) Query: 31 RQWGLDLIALVTLA--GALALQENLTAAVIALMFVTGRALENHAERRAQQDMSALLAKVP 88 R + L++ L++LA GA+ + + AAV+ +F +E + RA+ + L+A P Sbjct: 176 RHFSLNMNFLMSLAVIGAVLIGQWPEAAVVIFLFAAAEMIEALSLDRARNAIKGLMAMAP 235 Query: 89 QRAH-RYENGRIVEVALAQIRPGDRLLVRSGETVPVDGTLL-GAAVVDQSTLSGESLPLS 146 + A R ++ + V+ Q++ + V+ GE VP+DG ++ G + ++Q+ ++GES+P++ Sbjct: 236 EMATVRNDSNEWLPVSAVQVQLDALVRVKPGERVPLDGIIVDGQSTINQAPITGESMPVA 295 Query: 147 CAQGAFLPSGSINAGEAFELLASSTAEQGTLGHIVRLVHSAQQSRAPAARLADRYALWFV 206 G + +G+IN F+ ++ TL I++ V Q RAP R D++A +++ Sbjct: 296 KQSGDTVFAGTINERGTFDYRVTALQSNSTLARIIKSVQQVQGERAPTQRFVDQFARYYI 355 Query: 207 PVALGLAALA--------------WLLSGEPERALAVAVVATPCPLILAVPVALVCAMSR 252 P+ + LA L WL +AL + V+A PC L+++ PV +V ++ Sbjct: 356 PIVVLLAILVAVLPPLLLAQPFQPWLY-----KALVLLVIACPCALVISTPVTVVSGLAA 410 Query: 253 CAQRGVLIKHGGALEKLAHLHTLFLDKTGTLTSGKARLTAIDVAPGMEPHDLLRLAASLE 312 A+ G+LIK G LE L L LDKTGT+T GK +T + H +LRLAASL Sbjct: 411 AARHGILIKGGVYLELGRKLKALALDKTGTITVGKPVVTDTQQIHEGDLHGMLRLAASLS 470 Query: 313 QLSAHAIAQAVVAAALARGLPLALPE--QVSEQPGAGLTGQVDGRQVRVGTRDFV--LGL 368 Q S H ++ AVVA A+ AL E G G+ G + G +G + LG+ Sbjct: 471 QRSDHPVSSAVVAHWQAQQSTEALHEVSDFEALTGRGVRGTIGGEPYYLGNHRLIHELGI 530 Query: 369 DALPDWAVHPGARIGYEGTAGVYLALDGHLAGVMQL--ADQVRLETPRALRLLRTLGAQR 426 P+ A +E T + L + ++ L AD +R + A+ L+ +G Q Sbjct: 531 CG-PEL---EAALDAFEQTGKTAVVLGSGSSPLLILAAADTIRDGSQAAVAKLQQMGVQ- 585 Query: 427 IVMLTGDHREVATTIGHALGVDDILSEQTPASKLEAIRQAR-QQGVTMMVGDGVNDAPAL 485 +VMLTGD+ A IG +G+ D+ Q P KL AI + R + G MVGDG+NDAPAL Sbjct: 586 VVMLTGDNPHTAEAIGGKVGISDVRGNQLPDDKLAAINELRARYGYVGMVGDGINDAPAL 645 Query: 486 AAADVGVAMGARGAAAAAESAQVVLLVDRLDRLAFAVRLAQQTRRIALQSVVAGMGLSLL 545 A AD+G AMGA G A E+A V L+ DRL +LA + L+++T + +Q++ +G+ + Sbjct: 646 AQADIGFAMGAAGTDTALETADVALMDDRLGKLADFIGLSKKTHTVLMQNITLALGIKAV 705 Query: 546 AMVVAALGYLPPVAGAVLQEL-IDVAVILNALRVL 579 +V+ ALG + AV ++ + V+ N LR+L Sbjct: 706 FLVL-ALGGEATLWMAVFADMGASLLVVFNGLRLL 739 >gi|152980975|ref|YP_001355215.1| cation-translocating P-type ATPase [Janthinobacterium sp. Marseille] Length = 812 Score = 243 bits (621), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 185/541 (34%), Positives = 295/541 (54%), Gaps = 28/541 (5%) Query: 55 AAVIALMFVTGRALENHAERRAQQDMSALLAKVPQRAHRYENGRIVEVALAQIRPGDRLL 114 + V+ + + G+ LE A+++ + AL P+ A +G +VA+ ++ GD ++ Sbjct: 265 SVVVITLILLGKWLEARAKKQTASAIRALQKLRPESARIRRDGVDSDVAIDSVKVGDIVV 324 Query: 115 VRSGETVPVDGTLL-GAAVVDQSTLSGESLPLSCAQGAFLPSGSINAGEAFELLASSTAE 173 VR GE + VDGT++ G + VD+S ++GESLP+ GA + SINA + + Sbjct: 325 VRPGERIAVDGTIIEGNSQVDESLITGESLPVVKQLGAKVTGASINADGLLLVRTDAIGA 384 Query: 174 QGTLGHIVRLVHSAQQSRAPAARLADRYALWFVPVALGLAALA----WLLSGEPE----- 224 + TL I+R+V +AQ ++AP RL D+ + FVP+ L L ALA W L+G Sbjct: 385 ETTLSRIIRMVENAQSAKAPIQRLVDKVSAIFVPIVL-LIALATLIGWWLAGAGMETAII 443 Query: 225 RALAVAVVATPCPLILAVPVALVCAMSRCAQRGVLIKHGGALEKLAHLHTLFLDKTGTLT 284 A++V V+A PC L LA P A++ A+ G+LIK ALE + ++T+ DKTGTLT Sbjct: 444 NAVSVLVIACPCALGLATPTAIMAGTGVAAKAGILIKDAEALETVHRVNTVVFDKTGTLT 503 Query: 285 SGKARLTAIDVAPGMEPHDLLRLAASLEQLSAHAIAQAVVAAALARGLPLALPEQVSEQP 344 GK ++ + G+ LL+LAA+++ S H +A AV+ +A + L +V P Sbjct: 504 LGKPQVADMQ-GNGIPKKTLLQLAATIQNGSEHPLAHAVIESARKENIDLLPVSEVQALP 562 Query: 345 GAGLTGQVDGRQVRVGTRDFV--LGLD--ALPDWAVHPGARIGYEGTAGVYLAL---DGH 397 G G+ ++GR++++G+ + LGL+ AL + A + G +LAL Sbjct: 563 GRGVAAVINGRRLQLGSSRMIEELGLNGGALAERA----QELENTGHTISWLALADEPKE 618 Query: 398 LAGVMQLADQVRLETPRALRLLRTLGAQRIVMLTGDHREVATTIGHALGVDDILSEQTPA 457 L G++ ADQ++ PRA+ L LG V+L+GD+ A +G ALG+ ++++ PA Sbjct: 619 LLGLIAFADQIKDSAPRAISSLNGLGIDT-VLLSGDNYGSANAVGSALGIKHVIAQVLPA 677 Query: 458 SKLEAIRQARQQG--VTMMVGDGVNDAPALAAADVGVAMGARGAAAAAESAQVVLLVDRL 515 K I + QQG + MVGDG+NDAPALAAA VG+AM A G A +A + L+ Sbjct: 678 DKTAKITE-LQQGDHIVAMVGDGINDAPALAAAHVGIAM-ATGTDVAMHAAGITLMRGDP 735 Query: 516 DRLAFAVRLAQQTRRIALQSVVAGMGLSLLAMVVAALGYLPPVAGAVLQELIDVAVILNA 575 +A A+ ++++T Q++ +L+ + +AA G L P+ V+VI NA Sbjct: 736 ALVADAIDISRRTYSKIRQNLFWAFIYNLVGIPLAAFGLLNPMLAGAAMAFSSVSVISNA 795 Query: 576 L 576 L Sbjct: 796 L 796 >gi|152981057|ref|YP_001353319.1| cation-translocating P-type ATPase [Janthinobacterium sp. Marseille] Length = 823 Score = 239 bits (611), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 192/546 (35%), Positives = 280/546 (51%), Gaps = 20/546 (3%) Query: 54 TAAVIALMFVTGRALENHAERRAQQDMSALLAKVPQRAHR---YENGR-IVEVALAQIRP 109 + + + + R LE A R+A + L +P A R Y R + VA A++R Sbjct: 274 SVTMFIFLLLCSRYLELIARRKAAGALEKLQHALPASAARLTAYPAQREVTVVAAAELRA 333 Query: 110 GDRLLVRSGETVPVDGTLL-GAAVVDQSTLSGESLPLSCAQGAFLPSGSINAGEAFELLA 168 GD +LV+ GE +P DG ++ G VD S L+GES L +G +LP G+IN +A L Sbjct: 334 GDYILVKPGEAIPADGEIVSGETSVDMSLLTGESAALRKRKGDYLPGGAINIAQAVVLRV 393 Query: 169 SSTAEQGTLGHIVRLVHSAQQSRAPAARLADRYALWFVPVAL--GLAALAWLLSGEPERA 226 S A TL +++L+ A + A AD A WFV L +A A+ + RA Sbjct: 394 SKVAADSTLAALLKLIERAGNGKPRIAMWADSVASWFVAALLLFAVAVFAFWQWHDAARA 453 Query: 227 ----LAVAVVATPCPLILAVPVALVCAMSRCAQRGVLIKHGGALEKLAHLHTLFLDKTGT 282 +AV VV+ PC L LA P AL A R ++GVLI LE L + DKTGT Sbjct: 454 WPIAIAVLVVSCPCALSLATPTALAAATDRLVRQGVLIVQPHVLEVLHRTTHIVFDKTGT 513 Query: 283 LTSGKARLTAIDVAPGMEPHDLLRLAASLEQLSAHAIAQAVVAAALARGLPLALPEQVSE 342 LT GK L + ME L+ AA+LE SAH +AQA+VAAA + + + ++V Sbjct: 514 LTIGKPALHKVITFDEMEGPACLQFAAALETNSAHPLAQAIVAAANSTLVGAVIADEVVS 573 Query: 343 QPGAGLTGQVDGRQVRVGTRDFVLGLDALPDWAVHPGARIGYEGTAGVYLALDGHLAGVM 402 + G GL G VDG R+G +V L P P G VYL G Sbjct: 574 RAGQGLEGLVDGIPYRLGNAAYVAELTGRPLNDRVPA------GMTPVYLGCSGTWLARF 627 Query: 403 QLADQVRLETPRALRLLRTLGAQRIVMLTGDHREVATTIGHALGVDDILSEQTPASKLEA 462 L+D +R + + +R + LG + +++L+GD ++VA +G LG++++ P KL Sbjct: 628 DLSDAIRSDAQQVVRHFQKLG-KNVILLSGDQQDVAQYVGGKLGINEVHGACLPEQKLAF 686 Query: 463 IRQARQQG-VTMMVGDGVNDAPALAAADVGVAMGARGAAAAAESAQVVLLVDRLDRLAFA 521 ++ +QQG + MVGDG+NDA L AADV AMG+ GA A A VLL RL +A Sbjct: 687 VQALQQQGAIVAMVGDGINDAAVLRAADVSFAMGS-GAELAQTHADTVLLSPRLSAIADT 745 Query: 522 VRLAQQTRRIALQSVVAGMGLSLLAMVVAALGYLPPVAGAVLQELIDVAVILNALRVLTL 581 LA +T RI Q++ +L+A+ AA+G++ P + + V+LNALR+ + Sbjct: 746 AELAARTMRIIRQNLAWASVYNLIAIPAAAMGWINPWMSGIGMSVSSALVVLNALRLRRV 805 Query: 582 EKEEAR 587 ++ + R Sbjct: 806 QRLKLR 811 >gi|152981280|ref|YP_001353512.1| K+-transporting ATPase B chain [Janthinobacterium sp. Marseille] Length = 702 Score = 129 bits (325), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 138/474 (29%), Positives = 212/474 (44%), Gaps = 71/474 (14%) Query: 105 AQIRPGDRLLVRSGETVPVDGTLL-GAAVVDQSTLSGESLPLSCAQGAFLPSGS------ 157 + +R GD +LV +G+ +PVDG ++ G A VD+S ++GES P+ G + + Sbjct: 134 SDLRKGDTVLVEAGDVIPVDGEVIEGVASVDESAITGESAPVIRESGGDFSAVTGGTRVL 193 Query: 158 ---------INAGEAFELLASSTAEQGTLGHIVRLVHSAQQSRAPAARLADRYALWFVPV 208 +N GEAF + ++ +V A++ + P + AL + V Sbjct: 194 SDWLVVRIAVNPGEAF------------IDRMIAMVEGAKRQKTP-----NEIALTILLV 236 Query: 209 ALGLAALAWLLSGEP------ERALAVAVVATPCP-------LILAVPVAL--------V 247 AL + L ++ P E A A V ++P L+ +P + V Sbjct: 237 ALSIVFLVVTVTLLPMSLFSVEMAKAAGVASSPITMTVLIALLVCLIPTTIGGLLSAIGV 296 Query: 248 CAMSRCAQRGVLIKHGGALEKLAHLHTLFLDKTGTLTSGKARLTAIDVAPGMEPHDLLRL 307 MSR Q V+ G A+E + L LDKTGT+T G + + APG+ L + Sbjct: 297 AGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFYPAPGVTQIQLADV 356 Query: 308 A--ASLEQLSAHAIAQAVVAAAL----ARGLPLALPEQVSEQPGAGLTG-QVDGRQVRVG 360 A ASL + + ++A R + V ++G + R +R G Sbjct: 357 AQLASLADETPEGRSIVILAKQKFNMRERDIAALQASFVHFSAQTRMSGVDLGERAIRKG 416 Query: 361 TRDFV------LGLDALPDWAVHPGARIGYEGTAGVYLALDGHLAGVMQLADQVRLETPR 414 + D V LG + P+ I G+ + + DG + G ++L D V+ Sbjct: 417 SVDAVKKHVEALG-RSFPEEVSRLVDDISRRGSTPLVVVDDGRVMGAVELKDIVKGGIKE 475 Query: 415 ALRLLRTLGAQRIVMLTGDHREVATTIGHALGVDDILSEQTPASKLEAIRQARQQG-VTM 473 LR +G + VM+TGD++ A I GVDD L+E TP KL+ IR + QG + Sbjct: 476 RFAELRRMGI-KTVMITGDNKLTAAAIAAEAGVDDFLAEATPEDKLKLIRDYQSQGRLVA 534 Query: 474 MVGDGVNDAPALAAADVGVAMGARGAAAAAESAQVVLLVDRLDRLAFAVRLAQQ 527 M GDG NDAPALA ADV VAM + G AA E+ +V L +L V + +Q Sbjct: 535 MTGDGTNDAPALAQADVAVAMNS-GTQAAKEAGNMVDLDSNPTKLLEIVEIGKQ 587 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.134 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,453,311 Number of extensions: 56284 Number of successful extensions: 266 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 248 Number of HSP's successfully gapped: 6 Length of query: 735 Length of database: 1,221,021 Length adjustment: 90 Effective length of query: 645 Effective length of database: 888,291 Effective search space: 572947695 Effective search space used: 572947695 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)