BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0737.p (442 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transami... 113 2e-26 gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 112 5e-26 gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 109 4e-25 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 98 9e-22 gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-am... 95 8e-21 >gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transaminase [Janthinobacterium sp. Marseille] Length = 439 Score = 113 bits (283), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 116/426 (27%), Positives = 187/426 (43%), Gaps = 37/426 (8%) Query: 43 FYRDPVHFVSASGVWLRDQEGLDYLDAYNNVPSV--GHCHPHVVAAVSKQVATLNTHTRY 100 F P V+ASG++ +G LD + V GH HP + A+ KQ A+++ + Sbjct: 20 FKAKPRMLVAASGMYYTSDDGRQILDGTAGLWCVNAGHGHPKITEAIQKQAASMDYAPLF 79 Query: 101 LSNVVTSY--AERLLGTFPRALSKVLFTSSGTESVDLAMRLARLY------TGGTGFIVT 152 ++ A L P L++V F + G+E VD A+++A Y G T I Sbjct: 80 QIGHPLAFEAATALAEIAPAGLNRVFFCNDGSEGVDTALKIALAYHRIRGDAGRTRLIGR 139 Query: 153 RFAYHG------HSTAVAEITPAFGPGVPVGVNVRLVD-APDGYRQDAPV-GVKFAQDVA 204 AYHG +A FGPG+ +D A + Y + P+ G + A ++ Sbjct: 140 ERAYHGVGFGGIAVGGIAGNRKQFGPGLAADHLRHPLDIAKNAYSRGLPLHGAEMADELE 199 Query: 205 TAIADLERHGIKFAGLILDTVCSSDGLFVDPPGFLKEVVATVKKAGGVFVADEVQPGFGR 264 + L A +I++ + S G+ + P G+L+++ K G + + DEV GFGR Sbjct: 200 QRLLALHDPST-VAAVIVEPLQGSTGVILPPKGYLEKLRVICDKHGVLLIFDEVITGFGR 258 Query: 265 TGEGMWGFERHGIDPDIVVMGKPMGN-GMPIAATVTTSDIMQAFTERS---------GYF 314 G +G + G+ PD++V K + N +P+ A + I + F + + GY Sbjct: 259 LGTA-FGADFFGVKPDMIVCAKALTNAAVPMGAVIVHEKIHETFMQMAPADSIELFHGY- 316 Query: 315 NTFGGNTVCCAAASAVLDVIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIGDVRAIGLYA 374 T+ G+ + AAA A LDV E L A Y + LK + DVR +GL A Sbjct: 317 -TYSGHPLAAAAAIATLDVYREEQLFQRAAGMAPYFEDAAHSLK-GLPFVKDVRNLGLVA 374 Query: 375 AVEFVQPGTKNGDAVMALNVVNELRKRRVLISTCGPQGNILKIRPPLQFSSENCDILVTA 434 VE K G A + + + L++ +IL + PPL + D + + Sbjct: 375 GVELEGIAGKPG--ARAYELFTKAFWDKGLLTRV--TADILALSPPLIINKAQVDEMFGS 430 Query: 435 IDDTLR 440 I D L+ Sbjct: 431 ITDILK 436 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 112 bits (280), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 106/413 (25%), Positives = 180/413 (43%), Gaps = 52/413 (12%) Query: 45 RDPVHFVSASGVWLRDQEGLDYLDAYNN--VPSVGHCHPHVVAAVSKQVATL-NTHTRYL 101 R + F G+WL D +G YLD V +GH + A++ Q L N + Sbjct: 17 RPELVFTEGDGMWLTDHKGKRYLDYLQGWAVNCLGHSPQCIQDALNVQAKKLINPSPAFY 76 Query: 102 SNVVTSYAERLLGTFPRALSKVLFTSSGTESVDLAMRLARLY-------TGGTGFIVTRF 154 + + A L G +V F +SG E+ + A++LAR + G + + F Sbjct: 77 NEPSIALAALLTGN--SCFDRVFFANSGAEANESAVKLARKWGKLNKNAAGENRYEIITF 134 Query: 155 AYHGHSTAVAEITPA--------FGPGVPVGVNVRLVDAPDGYRQDAPVGVKFAQDVATA 206 + H +A ++ + + P VP L D V Sbjct: 135 DHSFHGRTLATMSASGKAGWDTIYAPQVPGFFKATLNDI---------------DSVKKL 179 Query: 207 IADLERHGIKFAGLILDTVCSSDGLFVDPPGFLKEVVATVKKAGGVFVADEVQPGFGRTG 266 I D K ++L+ V G+ F++ + A K+ G + + DEVQ G GRTG Sbjct: 180 ITD------KTIAVMLEPVQGEGGVIPATREFMQALRALTKEHGVLLIVDEVQTGMGRTG 233 Query: 267 EGMWGFERHGIDPDIVVMGKPMGNGMPIAATVTTSDIMQAFTERSGYFNTFGGNTVCCAA 326 E ++G++ GI PDI+ +GK +G G+P+AA + +I A E T+ GN + A Sbjct: 234 E-LFGYQLSGITPDIMTLGKGIGGGVPLAAMLCREEI--ACFEPGDQGGTYNGNPLMTAV 290 Query: 327 ASAVLDVIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIGDVRAIGLYAAVEFVQPGTKNG 386 +AV + + G + + K GAYL L +L +H G+ R GL A++ G+ G Sbjct: 291 GNAVAQALLAPGFLQSVKDKGAYLSAALLKLTEKHGLAGE-RGDGLLRALKL---GSDIG 346 Query: 387 DAVMALNVVNELRKRRVLISTCGPQGNILKIRPPLQFSSENCDILVTAIDDTL 439 + + +L +L+++ P+ ++L+ P L + E D ++ + L Sbjct: 347 PQI--VEKARDLEPVGLLLNS--PRPDLLRFMPALNVTYEELDQMIEMLSGVL 395 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 109 bits (272), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 116/414 (28%), Positives = 185/414 (44%), Gaps = 62/414 (14%) Query: 47 PVHFVSASGVWLRDQEGLDYLD---AYNNVPSVGHCHPHVVAAVSKQVATLNTHTR-YLS 102 PV G+WL D++G Y+D AY+ V S GH HP +V A+++Q L +R + + Sbjct: 26 PVVLSKGRGIWLWDEDGKRYMDMMSAYSAV-SFGHSHPQLVQALTQQAGQLAVTSRAFYT 84 Query: 103 NVVTSYAERLLGTFPRALSKVLFTSSGTESVDLAMRLARLYT--------GGTGFIVTRF 154 + + + + L + K L +SGTE+V+ +++ AR + IV Sbjct: 85 DQLGRFLQLLCEM--TGMDKALPMNSGTEAVETSLKAARKWAYKVKGVPDQQAQIIVCAG 142 Query: 155 AYHGHSTAV------AEITPAFGPGVPVGVNVRLVDAPDGYRQDAPVGVKFAQDVATAIA 208 + G ST + A+ FGP DG P G D A A Sbjct: 143 NFAGRSTTIVGFSSEAQYREGFGPF-------------DGGFVTIPYG-----DAAALEA 184 Query: 209 DLERHGIKFAGLILDTVCSSDGLFVDPPGFLKEVVATVKKAGGVFVADEVQPGFGRTGEG 268 + H F +++ + G+ V P +L + + + + DEVQ G GRTG Sbjct: 185 AITPHTAAF---LVEPIQGEGGIIVPPDAYLAQCREICTRRNILLICDEVQTGLGRTGR- 240 Query: 269 MWGFERHGIDPDIVVMGKPMGNGM-PIAATVTTSDIMQAFTERSGYFNTFGGNTVCCAAA 327 + + GI PD +++GK +G G+ P++A + S++M FT + +TFGGN + A Sbjct: 241 LLACDHEGIRPDGLILGKALGGGLLPVSAFLARSEVMDVFTP-GDHGSTFGGNPLAAAVG 299 Query: 328 SAVLDVIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIGDVRAIGLYAAVEFVQPGTKNGD 387 A L ++ LI A+Q G L+ GL L+ H I VR GL +E ++P Sbjct: 300 YAALSLLRDGELIAAAEQRGQRLREGLNALR--HPAIRSVRGKGLLIGLE-LEP-----Q 351 Query: 388 AVMALNVVNELRKRRVLISTCGPQGNILKIRPPLQFSSENCDILVTAIDDTLRI 441 + A + L + VL +++ PPL ++E AID LRI Sbjct: 352 VITARSFCERLMENGVLSKET--HHTVVRFAPPLIITAE-------AIDAALRI 396 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 98.2 bits (243), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 32/413 (7%) Query: 55 GVWLRDQEGLDYLDAYNN--VPSVGHCHPHVVAAVSKQVATLNTHTR--YLSNVVTSYAE 110 G WL D +G YLDA ++ V GH +P + +A+ Q+ L + V +E Sbjct: 44 GAWLYDTDGQRYLDAISSWWVNMFGHANPRINSALRSQLDMLEHAMLAGFTHEPVVQLSE 103 Query: 111 RLLGTFPRALSKVLFTSSGTESVDLAMRLARLYTGGTG------FIVTRFAYHGHSTAVA 164 +L L + S G +V++A++++ G F+ + +YHG + Sbjct: 104 QLAARTNHELGHCFYASDGASAVEIALKMSFHSWRNNGLSDKREFVCLKGSYHGETIGAL 163 Query: 165 EIT--PAFGPGVPVGV-NVRLVDAPDGYR-QDAPVGVKFAQDVATAIADL-ERHGIKFAG 219 +T P F + + +V +PD +D A+ A+A+ L + A Sbjct: 164 AVTDVPIFRDAYDAMLQHAHVVMSPDARAARDGETAADVARRAASALETLLQERSKHIAA 223 Query: 220 LILD-TVCSSDGLFVDPPGFLKEVVATVKKAGGVFVADEVQPGFGRTGEGMWGFERHGID 278 LI++ V + G+ + P +L+EV A K +ADE+ G GRTG + E+ + Sbjct: 224 LIVEPLVQCATGMAMYDPVYLQEVRALCDKYQVHLIADEIAVGCGRTGT-FFACEQAAVW 282 Query: 279 PDIVVMGKPMGNG-MPIAATVTTSDIMQAFTE---RSGYF--NTFGGNTVCCAAASAVLD 332 PD + + K + G +P++ +T +I Q+F G+ +++ GN + C AA A L Sbjct: 283 PDFLCLSKGISGGYLPLSLVMTRDEIYQSFYHGDVTRGFLHSHSYTGNPLACRAALATLA 342 Query: 333 VIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIGDVRAIGLYAAVEFVQPGTKNGDAVMAL 392 + E + +I+ + A L L L H + + R G+ A + V + Sbjct: 343 IFEEDDVINANRLRAARLTEALAPLAA-HPQVSNFRQRGMIWAFDAVIDNAEAASTFSRR 401 Query: 393 NVVNELRKRRVLISTCGPQGNILKIRPPLQFSSENCDILV----TAIDDTLRI 441 L +L P G + + PP ++E D L T + +R+ Sbjct: 402 FFTTALEHELLL----RPIGPTVYLMPPYILNNEEIDGLAARTQTVFEKVMRV 450 >gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-aminomutase [Janthinobacterium sp. Marseille] Length = 432 Score = 95.1 bits (235), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 100/343 (29%), Positives = 146/343 (42%), Gaps = 25/343 (7%) Query: 47 PVHFVSASGVWLRDQEGLDYLDAYNNV-PS-VGHCHPHVVAAVSKQVATLNTHTRYLSNV 104 P A G + D + Y+D + P+ VGH HP VV AV + TR LS Sbjct: 34 PRFITKAEGPYFWDADDRRYIDYIGSWGPAIVGHAHPDVVKAVQ------DAATRGLSFG 87 Query: 105 VTSYAE----RLLGTFPRALSKVLFTSSGTESVDLAMRLARLYTGGTGFIVTRFAYHGHS 160 + AE L+ ++ +V SSGTE+ A+RLAR TG I YHGH+ Sbjct: 88 APTEAEIEMAELICRLVPSIEQVRLVSSGTEAAMSALRLARGATGRDKIIKFEGCYHGHA 147 Query: 161 TAVAEITPAFGPGVPVGVNVRLVDAPDGYRQDAPVGVKFAQDVATAIADLERHGIKFAGL 220 + + G G+ N P+ + + V + + D A + G A + Sbjct: 148 DS---LLVKAGSGLLTFGNPTSAGVPEDFAKHTLV-LDY-NDPAQLENVFKEMGDSIACV 202 Query: 221 ILDTVCSSDGLFVDPPGFLKEVVATVKKAGGVFVADEVQPGFGRTGEGMWGFERHGIDPD 280 I++ V + L P FL+ + + G V + DEV GF G +GI PD Sbjct: 203 IVEPVAGNMNLLPATPEFLQTMRRVCTQYGAVMILDEVMSGFRVALGGAQSL--YGITPD 260 Query: 281 IVVMGKPMGNGMPIAATVTTSDIMQAFTERSGYFN--TFGGNTVCCAAASAVLDVIESEG 338 + V+GK +G G+P+AA +DIM+ G + T GN V AA A L +I++ G Sbjct: 261 LTVLGKVIGGGLPVAAFGGRADIMRHLAPLGGVYQAGTLSGNPVTVAAGMATLKLIQAPG 320 Query: 339 LIDNAKQTGAYLKRGLEQLKVQHQ---CIGDVRAI-GLYAAVE 377 +N L G + C V + GLY A E Sbjct: 321 FYENLTAQTTKLVHGFSAAAREADIAFCANSVGGMFGLYFASE 363 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,119,326 Number of extensions: 50871 Number of successful extensions: 140 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 124 Number of HSP's successfully gapped: 6 Length of query: 442 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 356 Effective length of database: 903,079 Effective search space: 321496124 Effective search space used: 321496124 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)