BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0727.p
         (370 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981127|ref|YP_001354297.1| carboxylate-amine ligase [Janth...   382   e-107

>gi|152981127|ref|YP_001354297.1| carboxylate-amine ligase
           [Janthinobacterium sp. Marseille]
          Length = 370

 Score =  382 bits (981), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/362 (50%), Positives = 236/362 (65%), Gaps = 4/362 (1%)

Query: 1   MGIELELQLVNRRNYNLASDAVDLLNWIEPRDLQKQIKLEMTQGMIELNSGIHTRVDELI 60
           MG+ELELQ+VNRR+YNL   + DLL  I+  D    IK E+T+ MIE+ + +HT   E++
Sbjct: 12  MGVELELQIVNRRDYNLTRGSSDLLVIIDKTDHGYDIKPEITESMIEIATSVHTDHKEML 71

Query: 61  EELKGLRAALNKGAQYLNIDVSGGGAHPFQHWNEQRITPSERFHYLHEKYGYLAKTFTVF 120
            EL  +R  L   A  LN+ ++GGGAHPFQHW +QRI P++R+  + E YGYLAK FTV+
Sbjct: 72  AELTAMRTLLISAADKLNLGLAGGGAHPFQHWEDQRIYPTDRYRLVSELYGYLAKQFTVY 131

Query: 121 GQHIHIGVENGDDALYLTHGFSRYVPHFIALSAASPFYQGADTKFDSSRSNVVRAFPLSG 180
           GQHIHIG   GD+A+ L H  +RY+PHFI +SA+SPFYQG DT F SSR   + AFPLSG
Sbjct: 132 GQHIHIGCATGDEAIRLAHMLARYIPHFITMSASSPFYQGVDTTFQSSRLTSINAFPLSG 191

Query: 181 TAPVHTKWAEFETYYDELHQMGIIASMKDFYWDIRPKPEYGTVEIRVCDTPLTIEHAAHL 240
             P  T W  F  Y+D++  +GI+ASMKDFYWDIRPKPEYGTVEIRVCDTPL+IE A  L
Sbjct: 192 YMPFVTDWDSFNAYFDKMSSLGIVASMKDFYWDIRPKPEYGTVEIRVCDTPLSIEVAVAL 251

Query: 241 GAYAQLLARWILTERPFVVADDFYLLYQYNRFEASRFGLNGQLALHGATPSQSRKLPIYE 300
             YAQ L+++   ++    A D YL Y YNRF+A RFGLNG L      P    +  I E
Sbjct: 252 AGYAQTLSKFFFAQQELKPAQDTYLTYSYNRFQACRFGLNGAL----INPINGTQTSIKE 307

Query: 301 HLLQQLQLLEPYVANEAERQTILRLRRIAHDRLSDASWLRQMFAQRGSLNDMMRLSSELW 360
            +LQ  ++L          + I  LR+      SDA WLR  + + GSL+D++R  S +W
Sbjct: 308 DILQTFEMLADIAQELGTTEAIELLRQRIQAGQSDADWLRASYEKSGSLSDVVRQQSAVW 367

Query: 361 MG 362
           M 
Sbjct: 368 MA 369


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.137    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 911,988
Number of extensions: 38468
Number of successful extensions: 83
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 82
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 285
Effective length of database: 906,776
Effective search space: 258431160
Effective search space used: 258431160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)