BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0715.p
         (337 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981385|ref|YP_001352176.1| glycosyl transferase family pro...   369   e-103

>gi|152981385|ref|YP_001352176.1| glycosyl transferase family
           protein [Janthinobacterium sp. Marseille]
          Length = 338

 Score =  369 bits (946), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/310 (63%), Positives = 231/310 (74%)

Query: 26  FAAARFIKEIGRGKDGARSLSREDAQLMYQAMLDGRVSDLELGAILLAMRIKGESVEEIA 85
           FAA RFIKEIGRG  GARSLSREDA  +Y AML+GRVSDLE+G I+LAMRIKGESV+EIA
Sbjct: 15  FAAGRFIKEIGRGVKGARSLSREDAYQLYAAMLNGRVSDLEMGGIMLAMRIKGESVDEIA 74

Query: 86  GFLAAAEASFVPLRAPSGPYAPVVLPSYNGSRKMANLTPLLCMLLVRRGVPVLMHGVTRD 145
           GFL AAE SF  L AP   YAP+VLPSYNGSR+M NLTPLL +LL R G PVL+HGVT D
Sbjct: 75  GFLDAAEQSFEQLPAPQSEYAPIVLPSYNGSRQMPNLTPLLALLLARAGAPVLIHGVTSD 134

Query: 146 PQRVTSAEIFSALDVRHATNASEAEALMAAGQPAFIPIAALAPAIARLLDMRARLGVRNS 205
           P RVT+AEI   +    +    +A    A   P  +PI  LAP ++RLL MR  LGVRNS
Sbjct: 135 PGRVTTAEILQEMGYPVSHTVEQAMQEFARHAPVLMPIEDLAPRLSRLLAMRRILGVRNS 194

Query: 206 THTLVKIMQPFAQPALRLTSYTHPEYLEMLTDYFSHSAPHERGDVFLMRGTEGETVANAR 265
           THTLVK+MQPFA  ALRLTSYTHPEYL MLT YF+ +AP  RG+ FLMRGTEGETVANA+
Sbjct: 195 THTLVKLMQPFATAALRLTSYTHPEYLTMLTGYFTTAAPAVRGEAFLMRGTEGETVANAK 254

Query: 266 RAQRIDWFSHGQRTVLVEKQSVAEDLPDLPEGRDAATTAQWIREVLEGRRPVPEAIAEQI 325
           RAQ+I+W   G+ T+LV+KQ   +D+P LP  RDA TTA+WI   L G  P+P +I EQ+
Sbjct: 255 RAQQINWIHDGECTILVQKQEPVDDMPPLPAERDAVTTARWIEAALRGEEPIPISIVEQV 314

Query: 326 EHCVDVAARI 335
           E C+ VA  +
Sbjct: 315 ERCLLVAKNL 324


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 658,175
Number of extensions: 24557
Number of successful extensions: 80
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 253
Effective length of database: 910,473
Effective search space: 230349669
Effective search space used: 230349669
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)