BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0710.p
         (167 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981780|ref|YP_001352163.1| methylated-DNA-[protein]-cystei...   222   7e-60
gi|152981545|ref|YP_001351826.1| methylated-DNA-[protein]-cystei...    68   3e-13

>gi|152981780|ref|YP_001352163.1| methylated-DNA-[protein]-cysteine
           methyltransferase [Janthinobacterium sp. Marseille]
          Length = 166

 Score =  222 bits (566), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 101/158 (63%), Positives = 124/158 (78%)

Query: 10  ALFSAVVHTPFGGMGIRSQAGALVEMVYLPRHYAEKEATDAVAAQAVQQIGRYLADPGFR 69
           +LF+A+V   FG +GIRS+ G + E+VYLP  + EK A DAV+ +A  Q+ RYL DP FR
Sbjct: 8   SLFTAIVEASFGAIGIRSEDGHIRELVYLPASFDEKAAVDAVSERAALQVERYLGDPDFR 67

Query: 70  FRLPLLPVGSVFQQRVWQAIAAIPCGQVQTYGQVAKRIQSAPRAVGQACGANWYPLVVPC 129
           F LPL P+G+ FQ +VW+AIA I  G+V TYG +A+R++SAPRAVGQACGANWYPLV+PC
Sbjct: 68  FDLPLAPIGTDFQNKVWKAIAEISRGEVLTYGDIARRVKSAPRAVGQACGANWYPLVIPC 127

Query: 130 HRVTAAGGLGGFSHHDDEDGFHLEVKRWLLRHEGVNGY 167
           HRVTAA GLGGFSH+DDE  FH+ VKRWLL HE V GY
Sbjct: 128 HRVTAANGLGGFSHYDDETSFHVGVKRWLLAHEMVEGY 165


>gi|152981545|ref|YP_001351826.1| methylated-DNA-[protein]-cysteine
           methyltransferase [Janthinobacterium sp. Marseille]
          Length = 164

 Score = 67.8 bits (164), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 19/137 (13%)

Query: 40  RHYAEKEATDAVAAQAV---------QQIGRYLADPGFRFRLPLLPVGSVFQQRVWQAIA 90
           +H+  K+     +AQ+          +Q+  Y +     F + L   G+ FQ+ VWQ ++
Sbjct: 32  KHFKGKDGWQPASAQSAANKHLQETARQLDEYFSGRRTEFDVTLDMSGTAFQRSVWQELS 91

Query: 91  AIPCGQVQTYGQVAKRIQS--APRAVGQACGANWYPLVVPCHRVT-AAGGLGGFSHHDDE 147
           AIP G   +Y Q A+R+ +  A RAVG A G N   ++VPCHRV  ++G + G++     
Sbjct: 92  AIPFGASVSYAQHAQRLGNPKALRAVGSAIGKNPVSIIVPCHRVIGSSGAVTGYAG---- 147

Query: 148 DGFHLEVKRWLLRHEGV 164
               LE KR+LL  EGV
Sbjct: 148 ---GLERKRFLLALEGV 161


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 413,016
Number of extensions: 15721
Number of successful extensions: 35
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 2
Length of query: 167
Length of database: 1,221,021
Length adjustment: 77
Effective length of query: 90
Effective length of database: 936,352
Effective search space: 84271680
Effective search space used: 84271680
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 126 (53.1 bits)