BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0691.p (529 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981231|ref|YP_001353367.1| ABC-type transport systems, ATP... 271 1e-73 gi|152981256|ref|YP_001355254.1| ABC-type uncharacterized transp... 250 2e-67 gi|152980136|ref|YP_001354236.1| ABC-type branched-chain amino a... 129 5e-31 gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transp... 110 2e-25 gi|152979961|ref|YP_001354796.1| spermidine/putrescine transport... 110 2e-25 >gi|152981231|ref|YP_001353367.1| ABC-type transport systems, ATPase component [Janthinobacterium sp. Marseille] Length = 511 Score = 271 bits (692), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 172/496 (34%), Positives = 276/496 (55%), Gaps = 20/496 (4%) Query: 7 LQMTGISKSFGATRALSEMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDRGDILLD 66 L++ I+K + + A ++L+++PGEIHA++GENGAGKSTLMK++ G PD G +L + Sbjct: 5 LELHSITKRYPSVVANDGINLSVKPGEIHAVLGENGAGKSTLMKIIYGSVKPDAGKVLWN 64 Query: 67 GKPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRWGLIDHAAMRKRTDA 126 GK V + +P +R GI +++Q ++ ++V N+ +G T+ +D A +R Sbjct: 65 GKEVHIANPAMARELGIAMVFQHFSLFDTLTVVENIALGLPHDTK---LDELA--RRISD 119 Query: 127 VLSQLGAAFRASDRAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEHLFGVV 186 Q G LS+ E Q+VEI RAL+ + +++I+DEPT+ L+ + E LF + Sbjct: 120 TAEQYGLELEPQRHVHTLSVGECQRVEIVRALLAKPQLLILDEPTSVLTPQAVEKLFETL 179 Query: 187 RRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELTREQIDSERIVQMMVGRSLGE 246 R+L EG +I+YISH++ E+ AL D TV+R G G + + + +MM+G Sbjct: 180 RKLAAEGCSILYISHKLDEIRALCDTCTVVRAGKNTGICDPREESAASLSRMMIGCEPPP 239 Query: 247 FYQHQRMAPEQAAALPTVLQVQDLAGGRVKP-------ASFTVRAGEVLGFAGLVGAGRT 299 +H +P Q T+L V++L+ + P +F +RAGE+LG AG+ G G+ Sbjct: 240 I-KHVLRSPGQ-----TLLAVKNLSLKKNHPFATELSDINFELRAGEILGIAGVSGNGQQ 293 Query: 300 ELARLLFGADARSGGQ-ILLGDQALQIDEPRAAMRAGIAYVPEDRKGQGLFLQMAVGTNA 358 EL L G D R+ Q ILL + + P G+ +VPE+R G+G M++ N Sbjct: 294 ELLAALSGEDPRAEAQMILLQGERVGHFNPAQRRERGLGFVPEERLGRGAVPDMSLADNI 353 Query: 359 TM-NVAGRHARLGLVRSRALRGVAQASIRRLNVKVAHPDVAVGKLSGGNQQKVLLARWLE 417 + + G G +R A+ +A I R VK P A LSGGN QK ++ R + Sbjct: 354 LLSHQTGATISSGFIRKHAIVKMATDVIERFVVKAGGPHAAARSLSGGNLQKYIVGREVM 413 Query: 418 IAPKVLILDEPTRGVDIYAKSEIYQLIHKLAEQGVAVVVISSELPEIIGICDRVLVMREG 477 PKVLI+ +PT GVD+ A ++I + L + G A++VIS EL E+ I DR++V+ +G Sbjct: 414 RNPKVLIVAQPTWGVDVGAAAQIRAELVALRDAGCALLVISEELDELFEISDRLMVIAKG 473 Query: 478 SITGELSGAAITQESI 493 ++ ++ +A T + I Sbjct: 474 RLSPSIASSAATIDLI 489 Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 7/237 (2%) Query: 12 ISKSFGATRALSEMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDRGD-ILLDGKPV 70 + K+ LS+++ +R GEI + G +G G+ L+ LSG ILL G+ V Sbjct: 259 LKKNHPFATELSDINFELRAGEILGIAGVSGNGQQELLAALSGEDPRAEAQMILLQGERV 318 Query: 71 ALRDPGASRAAGINLIYQEL---AVAPNISVAANVFMGSEL--RTRWGLI-DHAAMRKRT 124 +P R G+ + +E P++S+A N+ + + G I HA ++ T Sbjct: 319 GHFNPAQRRERGLGFVPEERLGRGAVPDMSLADNILLSHQTGATISSGFIRKHAIVKMAT 378 Query: 125 DAVLSQLGAAFRASDRAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEHLFG 184 D + + A A LS Q+ + R ++ +++I+ +PT + + Sbjct: 379 DVIERFVVKAGGPHAAARSLSGGNLQKYIVGREVMRNPKVLIVAQPTWGVDVGAAAQIRA 438 Query: 185 VVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELTREQIDSERIVQMMVG 241 + LRD G A++ IS + E++ ++DR+ V+ G + + I Q M G Sbjct: 439 ELVALRDAGCALLVISEELDELFEISDRLMVIAKGRLSPSIASSAATIDLIGQWMSG 495 >gi|152981256|ref|YP_001355254.1| ABC-type uncharacterized transport systems, ATPase component [Janthinobacterium sp. Marseille] Length = 523 Score = 250 bits (638), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 160/516 (31%), Positives = 265/516 (51%), Gaps = 32/516 (6%) Query: 6 ILQMTGISKSFGATRALSEMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDRGDILL 65 IL++ G++K FG+ L+++ L + GE+H L+GENGAGKSTL ++ GVH PD G I Sbjct: 3 ILEIAGVTKRFGSHLVLNDISLNVEAGEVHCLLGENGAGKSTLCNLIFGVHRPDAGLIKY 62 Query: 66 DGKPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRWGLIDHAAMRKRTD 125 DG P + GI +++Q ++ N+SV N+ +G ++ + +R Sbjct: 63 DGGEFRPSGPAHALELGIAMVHQHFSLVSNMSVVENLMLGRA----QAILKQDFIIRRMQ 118 Query: 126 AVLSQLGAAFRASDRAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEHLFGV 185 + + G LS+ E+Q++EI + L+ R++++DEPTA L E + L V Sbjct: 119 ELADEYDLKIDPHCIVGDLSVGERQRIEIIKCLLSNPRLLLLDEPTAVLPPEEVDSLLAV 178 Query: 186 VRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELTREQIDSERIVQMMVGR--- 242 R++ + G +I ++H++AE+ +ADR +VLR G V + E D +V+ MVGR Sbjct: 179 CRKVAESGRGVILVTHKLAEIAKVADRTSVLRQGRIVESVCMEGADMHALVRSMVGRDVK 238 Query: 243 --------SLGEFYQHQR-----------MAPEQAAALPTV----LQVQDLAG-GRVKPA 278 +LG + + ++ LP + L QD G R+ Sbjct: 239 SGDSVLAATLGILSDAAQDAANATPAAAAVVDSRSLGLPALQLQGLSFQDKDGVTRLSDV 298 Query: 279 SFTVRAGEVLGFAGLVGAGRTELARLLFGADARSGGQILLGDQALQIDEPRAAMRAGIAY 338 +V GE++G AG+ G G++EL ++ G +GG + +G+Q L + AG Sbjct: 299 HLSVARGEIVGIAGVEGNGQSELGAIIAGLLTPTGGAMKIGEQDLTGSSAQDITDAGAGI 358 Query: 339 VPEDRKGQGLFLQMAVGTNATMNVAGRHARLGLVRSRALRGVAQASIRRLNVKVAHPDVA 398 +PEDR +++V N + + +R GL+ + A + +V+ P+ Sbjct: 359 IPEDRHAVACISELSVAENLFLGSLEKFSRFGLLDREKMAKQAATMMTEFDVRATSPNAP 418 Query: 399 VGKLSGGNQQKVLLARWLEIAPKVLIL-DEPTRGVDIYAKSEIYQLIHKLAEQGVAVVVI 457 + LSGGNQQK +LAR L + P + +L +PTRG+D+ A ++ I A G+ V++I Sbjct: 419 MSSLSGGNQQKAVLARELSLDPLIFLLAAQPTRGLDVGAVEAVFNRIRTAASNGLGVLLI 478 Query: 458 SSELPEIIGICDRVLVMREGSITGELSGAAITQESI 493 SS+L E+I + DRV V+ G+I GEL +E I Sbjct: 479 SSDLNELIAVSDRVAVLYRGAIVGELPADPANREKI 514 Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 9/245 (3%) Query: 5 PILQMTGIS--KSFGATRALSEMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDRGD 62 P LQ+ G+S G TR LS++HL++ GEI + G G G+S L +++G+ P G Sbjct: 277 PALQLQGLSFQDKDGVTR-LSDVHLSVARGEIVGIAGVEGNGQSELGAIIAGLLTPTGGA 335 Query: 63 ILLDGKPVALRDPGASRAAGINLIYQE---LAVAPNISVAANVFMGS-ELRTRWGLIDHA 118 + + + + AG +I ++ +A +SVA N+F+GS E +R+GL+D Sbjct: 336 MKIGEQDLTGSSAQDITDAGAGIIPEDRHAVACISELSVAENLFLGSLEKFSRFGLLDRE 395 Query: 119 AMRKRTDAVLSQLGA-AFRASDRAGRLSIAEQQQVEIARALVHRSRIVIMD-EPTAALSE 176 M K+ ++++ A + LS QQ+ +AR L I ++ +PT L Sbjct: 396 KMAKQAATMMTEFDVRATSPNAPMSSLSGGNQQKAVLARELSLDPLIFLLAAQPTRGLDV 455 Query: 177 RETEHLFGVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELTREQIDSERIV 236 E +F +R GL ++ IS + E+ A++DRV VL G+ VGEL + + E+I Sbjct: 456 GAVEAVFNRIRTAASNGLGVLLISSDLNELIAVSDRVAVLYRGAIVGELPADPANREKIG 515 Query: 237 QMMVG 241 MM G Sbjct: 516 AMMSG 520 >gi|152980136|ref|YP_001354236.1| ABC-type branched-chain amino acid transport system ATP-binding protein [Janthinobacterium sp. Marseille] Length = 256 Score = 129 bits (324), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 127/235 (54%), Gaps = 11/235 (4%) Query: 1 MTSTPILQMTGISKSFGATRALSEMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDR 60 M+ IL + G+SK FG +ALS++++ I G+I+ L+G NGAGK+T V++G++ D Sbjct: 1 MSEQIILNIAGVSKRFGGLQALSDVNIKIMQGQIYGLIGPNGAGKTTFFNVITGLYQADT 60 Query: 61 GDILLDGKPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRWGLI----- 115 G L GKP + P AGI +Q + + ++ NV +G +RT GL Sbjct: 61 GSFELAGKPYSPSAPHKVAKAGIARTFQNIRLFGEMTALENVMIGRHVRTHQGLFGAVFH 120 Query: 116 ------DHAAMRKRTDAVLSQLGAAFRASDRAGRLSIAEQQQVEIARALVHRSRIVIMDE 169 + A +R+R +L +G A A A LS +Q+++EIARAL +++ +DE Sbjct: 121 HKAARREEAEIRQRAMELLEFVGIAKFAERTARHLSYGDQRRLEIARALATDPQLLALDE 180 Query: 170 PTAALSERETEHLFGVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGE 224 P A ++ E L ++ +++ EG I+ I H + + L DR+TVL G + E Sbjct: 181 PAAGMNATEKLGLRELLVKIKAEGKTILLIEHDVKLMMGLCDRITVLDYGKPIAE 235 Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 30/222 (13%) Query: 279 SFTVRAGEVLGFAGLVGAGRTELARLLFGADARSGGQILLGDQALQIDEPRAAMRAGIAY 338 + + G++ G G GAG+T ++ G G L + P +AGIA Sbjct: 26 NIKIMQGQIYGLIGPNGAGKTTFFNVITGLYQADTGSFELAGKPYSPSAPHKVAKAGIAR 85 Query: 339 VPEDRKGQGLFLQMAVGTNATMNVAGRHARL--GL----------------VRSRALRGV 380 ++ + LF +M N + GRH R GL +R RA+ + Sbjct: 86 TFQNIR---LFGEMTALENVMI---GRHVRTHQGLFGAVFHHKAARREEAEIRQRAMELL 139 Query: 381 AQASIRRLNVKVAHPDVAVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEI 440 I + + A LS G+Q+++ +AR L P++L LDEP G++ K + Sbjct: 140 EFVGIAKFAERTAR------HLSYGDQRRLEIARALATDPQLLALDEPAAGMNATEKLGL 193 Query: 441 YQLIHKLAEQGVAVVVISSELPEIIGICDRVLVMREGSITGE 482 +L+ K+ +G +++I ++ ++G+CDR+ V+ G E Sbjct: 194 RELLVKIKAEGKTILLIEHDVKLMMGLCDRITVLDYGKPIAE 235 >gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transport system, duplicated ATPase component [Janthinobacterium sp. Marseille] Length = 533 Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 133/504 (26%), Positives = 234/504 (46%), Gaps = 41/504 (8%) Query: 6 ILQMTGISKSFGATRALSEMHLTIRPGEIHALMGENGAGKS-TLMKVLS-GVHAPDRGDI 63 +L + + SF ++ ++++ +I GE AL+GE+G+GK+ T + +L A G I Sbjct: 3 LLDIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSLLRLNQDATYGGKI 62 Query: 64 LLDGKPVALRDPGASRAA---GINLIYQELAVAPNISVAANVFMGSELRTRWGLIDHAAM 120 L +G+ + + A R+ + +I+QE A N + L G+ AA Sbjct: 63 LFEGQDILQKTEAAMRSVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGISARAAA 122 Query: 121 RKRTDAVLSQLG---AAFRASDRAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSER 177 RT +L + G RA LS ++Q+ IA AL + +++I DEPT AL Sbjct: 123 L-RTVELLDKTGIPEPQRRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDVT 181 Query: 178 ETEHLFGVVRRL-RDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELTREQIDS---E 233 + ++ +L R+E +A++ I+H + V ADRV V+ G + T +Q+ S E Sbjct: 182 IQVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGRLLEVATTQQLFSAPRE 241 Query: 234 RIVQMMVGRSLGEFYQHQRMAPEQAAALPTVLQVQ---DLAGGRVKPASFTV-------- 282 + ++ + +Q + E A L QV D+ G K F Sbjct: 242 AYTKKLLA---SQPHQLVNVVSEAATPLLKAEQVSCTFDIKKGWFKKIPFVAVDQVDVQV 298 Query: 283 RAGEVLGFAGLVGAGRTELA-RLLFGADARSGGQILLGDQAL--QIDEPRAAMRAGIAYV 339 + GE LG G G+G++ L LL + A G+I QA+ Q + +RA + V Sbjct: 299 KPGETLGIVGESGSGKSTLGLALLRLSGAHVKGEIAFDGQAITHQSRDALRPLRARMQIV 358 Query: 340 PEDRKGQGLFLQMAVGTNATMNVAGRHARLGL--VRSRALRGVAQASIR-RLNVKVAHPD 396 +D L + V +A +LG +R G+ + + + + H Sbjct: 359 FQDPFA-SLSPRRTVEQIVGEGLALHQPQLGPHGIRKAVADGLQEVGLSAEMMTRYPH-- 415 Query: 397 VAVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLIHKLAEQ-GVAVV 455 + SGG +Q++ +AR L + P +++LDEPT +D+ + ++ L+ L ++ G+A + Sbjct: 416 ----EFSGGQRQRIAIARALVLKPDLILLDEPTSSLDVSVQHQVLLLLADLQKKYGMAYI 471 Query: 456 VISSELPEIIGICDRVLVMREGSI 479 IS +L I + RV+VM++G + Sbjct: 472 FISHDLAVIRAMAHRVMVMKDGRV 495 Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 121/236 (51%), Gaps = 18/236 (7%) Query: 3 STPILQMTGISKSFGATRALSE---------MHLTIRPGEIHALMGENGAGKSTL---MK 50 +TP+L+ +S +F + + + + ++PGE ++GE+G+GKSTL + Sbjct: 263 ATPLLKAEQVSCTFDIKKGWFKKIPFVAVDQVDVQVKPGETLGIVGESGSGKSTLGLALL 322 Query: 51 VLSGVHAPDRGDILLDGKPVALRDPGASRA--AGINLIYQELAVAPNISVAANVFMGSEL 108 LSG H +G+I DG+ + + A R A + +++Q+ + + +G L Sbjct: 323 RLSGAHV--KGEIAFDGQAITHQSRDALRPLRARMQIVFQDPFASLSPRRTVEQIVGEGL 380 Query: 109 RTRWGLIDHAAMRKRTDAVLSQLGAAFRASDR-AGRLSIAEQQQVEIARALVHRSRIVIM 167 + +RK L ++G + R S ++Q++ IARALV + ++++ Sbjct: 381 ALHQPQLGPHGIRKAVADGLQEVGLSAEMMTRYPHEFSGGQRQRIAIARALVLKPDLILL 440 Query: 168 DEPTAALSERETEHLFGVVRRLRDE-GLAIIYISHRMAEVYALADRVTVLRDGSFV 222 DEPT++L + ++ L+ + G+A I+ISH +A + A+A RV V++DG V Sbjct: 441 DEPTSSLDVSVQHQVLLLLADLQKKYGMAYIFISHDLAVIRAMAHRVMVMKDGRVV 496 >gi|152979961|ref|YP_001354796.1| spermidine/putrescine transport system ATP-binding protein [Janthinobacterium sp. Marseille] Length = 366 Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 15/244 (6%) Query: 6 ILQMTGISKSFGATRALSEMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDRGDILL 65 +L++ +++ FG + + L+I GE L+G +G GK+TL+++++G PD G ILL Sbjct: 3 LLEIRNLTRRFGDNTVVDNISLSIEAGEFFTLLGPSGCGKTTLLRMIAGFDVPDAGQILL 62 Query: 66 DGKPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRWGLIDHAAMRKRTD 125 DG + P + ++Q A+ P+++V N+ E+ A ++K+ D Sbjct: 63 DGVDLTGVPP---EQRPVRTVFQNYALFPHMTVGGNIAFPLEMAN----TPKAEIQKKVD 115 Query: 126 AVLSQLGAAFRASDRAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEHL-FG 184 L + A+ LS ++Q+V IARALV R +++++DEP +AL + E + Sbjct: 116 EALEDVRLTGFAARYPHELSGGQRQRVSIARALVTRPKLLLLDEPLSALDAQLREQMQIE 175 Query: 185 VVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELTREQIDSE-RIVQMMVGRS 243 ++ ++ G+ IY++H AE AL+ R+ V+ G EQ+D RI R Sbjct: 176 LINLQKEVGITFIYVTHDQAEALALSHRIAVMNKGQV------EQLDEPTRIYSYPRSRF 229 Query: 244 LGEF 247 + +F Sbjct: 230 VADF 233 Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 25/212 (11%) Query: 275 VKPASFTVRAGEVLGFAGLVGAGRTELARLLFGADARSGGQILLGDQALQIDEPRAAMRA 334 V S ++ AGE G G G+T L R++ G D GQILL L Sbjct: 19 VDNISLSIEAGEFFTLLGPSGCGKTTLLRMIAGFDVPDAGQILLDGVDL----------T 68 Query: 335 GIAYVPEDR------KGQGLFLQMAVGTNATMNVAGRHARLGLVRSRALRGVAQASIRRL 388 G+ PE R + LF M VG N + + ++ + + + Sbjct: 69 GVP--PEQRPVRTVFQNYALFPHMTVGGNIAFPLEMANTPKAEIQKKVDEALEDVRLTGF 126 Query: 389 NVKVAHPDVAVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEI-YQLIHKL 447 + H +LSGG +Q+V +AR L PK+L+LDEP +D + ++ +LI+ Sbjct: 127 AARYPH------ELSGGQRQRVSIARALVTRPKLLLLDEPLSALDAQLREQMQIELINLQ 180 Query: 448 AEQGVAVVVISSELPEIIGICDRVLVMREGSI 479 E G+ + ++ + E + + R+ VM +G + Sbjct: 181 KEVGITFIYVTHDQAEALALSHRIAVMNKGQV 212 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.319 0.134 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,174,564 Number of extensions: 51711 Number of successful extensions: 501 Number of sequences better than 1.0e-08: 59 Number of HSP's gapped: 374 Number of HSP's successfully gapped: 104 Length of query: 529 Length of database: 1,221,021 Length adjustment: 88 Effective length of query: 441 Effective length of database: 895,685 Effective search space: 394997085 Effective search space used: 394997085 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)