BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0684.p
         (151 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981675|ref|YP_001352119.1| hypothetical protein mma_0429 [...   216   6e-58

>gi|152981675|ref|YP_001352119.1| hypothetical protein mma_0429
           [Janthinobacterium sp. Marseille]
          Length = 152

 Score =  216 bits (549), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 115/150 (76%), Positives = 128/150 (85%)

Query: 1   MPKPKLTLSVQYADDRLKDTITRPLLRRWVQAALFAPAELTLRFVGTEEGRDLNRDYRGK 60
           + K KL+LSVQY D RL+D ITRP LR WV+AAL APA++TLRFV   EG+DLNR+YRGK
Sbjct: 2   LQKNKLSLSVQYPDKRLQDIITRPKLRSWVKAALLAPAQITLRFVDAAEGKDLNRNYRGK 61

Query: 61  DYATNVLTFAYTEDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVLHAQGY 120
           DYATNVLTFAYTEDEDSE T+ADII CTDVL+ EAAEQ+KSVEEH AHLVVHGVLHAQGY
Sbjct: 62  DYATNVLTFAYTEDEDSETTQADIILCTDVLQLEAAEQEKSVEEHAAHLVVHGVLHAQGY 121

Query: 121 DHEDDAEATEMEALETEILAALGYDNPYAS 150
           DHE D EA EMEALE EILA LG+ NPY +
Sbjct: 122 DHESDEEAEEMEALEIEILADLGFRNPYIN 151


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.314    0.131    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 300,247
Number of extensions: 10436
Number of successful extensions: 20
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 1,221,021
Length adjustment: 75
Effective length of query: 76
Effective length of database: 943,746
Effective search space: 71724696
Effective search space used: 71724696
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 125 (52.8 bits)