BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0683.p
         (292 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980041|ref|YP_001352118.1| Mg2+ and Co2+ transporter [Jant...   451   e-128
gi|152980989|ref|YP_001355123.1| hemolysin [Janthinobacterium sp...   115   3e-27

>gi|152980041|ref|YP_001352118.1| Mg2+ and Co2+ transporter
           [Janthinobacterium sp. Marseille]
          Length = 296

 Score =  451 bits (1161), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/293 (74%), Positives = 255/293 (87%), Gaps = 1/293 (0%)

Query: 1   MQDHPSSVKS-DAKPHRSLFERLTALISPEPENRAELLEVLHDAHERNLIDADALSMIEG 59
           MQD P+S KS DAKPHRS+FERLTALI+PEPE+R+ELL +LHDAHERNLIDADAL+MIEG
Sbjct: 1   MQDIPTSGKSGDAKPHRSIFERLTALIAPEPESRSELLTILHDAHERNLIDADALAMIEG 60

Query: 60  VFQVSDLAVRDIMVPRSQMDTIDISKPIETWMPEVLATSHSRFPAIDGERDKVIGILLAK 119
           VFQVS+L+ RDIMVPR+QMD +DI+KPIE W+P VL+T+HSRFPA+DGERDKV+GIL+AK
Sbjct: 61  VFQVSELSARDIMVPRAQMDVVDITKPIEEWLPMVLSTAHSRFPAVDGERDKVVGILMAK 120

Query: 120 DLLRYYAEESFDVRDMLRPAIFIPESKRLNVLLRDFRANRNHMAVVVDEYGGVAGLITIE 179
           DLLRYYAEESFD+R MLR A+FIPESKRLNVLL DFRA  NHMA+VVDEYGGVAGLITIE
Sbjct: 121 DLLRYYAEESFDIRRMLRTAVFIPESKRLNVLLGDFRAKHNHMAIVVDEYGGVAGLITIE 180

Query: 180 DVLEQIVGDIEDEYDFDEAEDNVLALKDGPNGACWRVKALTEIEQFNEEVGSRFSDEDAD 239
           DVLEQIVGDIEDEYDFD  EDN+L++K G +G  WRVKALTEI QFNEE+G    + D D
Sbjct: 181 DVLEQIVGDIEDEYDFDNDEDNILSIKAGEHGPRWRVKALTEIAQFNEELGVSLFNPDVD 240

Query: 240 TIGGLVANHVGRVPRKGDEFDIDGLHFEVLRADARQVHVLLVSQLPPTPVADE 292
           TIGG +A+H+GR+P KG+  DID L FE+LRADAR +HV+LV +LPP    DE
Sbjct: 241 TIGGYIADHLGRMPHKGEVLDIDDLRFEILRADARHIHVVLVEKLPPAVSEDE 293


>gi|152980989|ref|YP_001355123.1| hemolysin [Janthinobacterium sp.
           Marseille]
          Length = 443

 Score =  115 bits (288), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 133/266 (50%), Gaps = 21/266 (7%)

Query: 35  ELLEVLHDAHERNLIDADALSMIEGVFQVSDLAVRDIMVPRSQMDTIDISKPIETWMPEV 94
           E+  +  +  +  L +     ++    ++ D  V  +M PR  +  ID+  PIE  + ++
Sbjct: 178 EIAGLFREGTDAGLFEKTEHDIVSRALRLDDQRVAGLMTPRLDVHFIDLEDPIEVNLAKI 237

Query: 95  LATSHSRFPAIDGERDKVIGILLAKDL----LRYYAEESFDVRDMLRPAIFIPESKRLNV 150
             +S++RFP   G+   VIGI+ A  L    +R  A  + D+    RP +F+PE+     
Sbjct: 238 ADSSYNRFPVCKGDISHVIGIVHAGSLFEQAIRGKAINTVDIAAATRPPLFVPETISAMQ 297

Query: 151 LLRDFRANRNHMAVVVDEYGGVAGLITIEDVLEQIVGD---IEDEYDFDEAEDNVLALKD 207
           LL   + NR  +A+V+DEYG + G++T+ DVL  +VGD   I++ ++ D    +     D
Sbjct: 298 LLETLKKNRAELALVIDEYGEIEGIVTLSDVLGALVGDVSVIDEHHEVDGVRRD-----D 352

Query: 208 GPNGACWRVKALTEIEQFNE--EVGSRFSDEDAD---TIGGLVANHVGRVPRKGDEFDID 262
           G     W +      ++F E  E   RF +E +    T+ G V   +G +P+  D F+ +
Sbjct: 353 G----SWLIDGGVSFDRFRELLETDVRFPEEASGTYHTLAGFVMTFLGHIPQMSDSFEWE 408

Query: 263 GLHFEVLRADARQVHVLLVSQLPPTP 288
           G   EV+  D  ++  LL+++L P P
Sbjct: 409 GYRIEVVDMDRNRIDRLLITKLDPGP 434


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.137    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 692,840
Number of extensions: 29412
Number of successful extensions: 75
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 2
Length of query: 292
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 210
Effective length of database: 917,867
Effective search space: 192752070
Effective search space used: 192752070
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 129 (54.3 bits)