BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0682.p
         (541 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980227|ref|YP_001352117.1| apolipoprotein N-acyltransferas...   506   e-144

>gi|152980227|ref|YP_001352117.1| apolipoprotein N-acyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 516

 Score =  506 bits (1303), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 293/486 (60%), Positives = 347/486 (71%), Gaps = 18/486 (3%)

Query: 38  NVFAFAPFKLWPLQILALAWLFHGVLAQPQASWRRHFLRGWLYGFGWAAAGVHWLYISMH 97
           NVFAFAPF  WPLQILALA      L     S +   L GWLYGFGW+A  V+WLYISMH
Sbjct: 25  NVFAFAPFGFWPLQILALA--LLFHLLLQAQSVKAGVLLGWLYGFGWSAVCVYWLYISMH 82

Query: 98  DYGGMPGWMAALAVALLALYLGLYAGAATALAGWLRKRWSSSPLVLALFMLPALWALSEW 157
            YGGMP  +AALAVALLAL LG +   AT LA   R   +    ++ L +LPALW  SEW
Sbjct: 83  QYGGMPAPLAALAVALLALLLGAFPALATGLATRFRLGRTVPAWIMLLLVLPALWMFSEW 142

Query: 158 TRGWVFTGFPWLVSGYAHTVGPLAAFAPIGGVYFVGWVASLIAGSLALLWMGLCRKGVAG 217
            RGWV TGFPW +SGYAHT  PL  +AP+ GVY +GW+A+++A  LALL    C+K   G
Sbjct: 143 LRGWVLTGFPWAISGYAHTDSPLTGYAPLIGVYGLGWLAAVLAACLALL---PCKKAAGG 199

Query: 218 TGQRIILPMCIAALLCAAGVALRMVKWTAPQGRPITVRLLQGNIPQEMKFSNDALVSTLS 277
                     +   +   G+ L+ V WT P G+ I+VRLLQGN+PQE+KF  +   +TL+
Sbjct: 200 ----------LFLAILLIGLGLKSVSWTTPNGQAISVRLLQGNVPQEIKFDAEQTNATLT 249

Query: 278 MYEQMISAAPADLIATPETAIPLLPQQLPPDYLERIARFVQNSGSHLALGIPLSDGPQLY 337
           +YE +I AAPADLIATPETA+PLL  QLP DYL R+A F   S SHLA+GIP+SDGPQ Y
Sbjct: 250 LYEDLIRAAPADLIATPETALPLLAHQLPVDYLPRLAEFATASNSHLAIGIPISDGPQQY 309

Query: 338 ANSVLGFGPGVGSALQP--YRYDKHHLVPFGEFIPPGFRWFVDLMHIPLGDMTRGAPVQS 395
           ANSV+G  P   +   P  YRYDKHHLVPFGEF+P GFRWFVD+MHIPLGD +RG  +Q+
Sbjct: 310 ANSVIGISPTPANRATPKLYRYDKHHLVPFGEFVPFGFRWFVDMMHIPLGDFSRGDALQA 369

Query: 396 PFGVKDQWVLPNICYEDLFGEEIAGQLRDAYRAAQPQASVLLNLSNIAWFGNSIALPQHL 455
           PF VKDQWVLPNICYEDLFGEEIAGQLR +  A  P A++LLN+SNIAWFG+SIALPQHL
Sbjct: 370 PFSVKDQWVLPNICYEDLFGEEIAGQLRASDAAGSPVATLLLNVSNIAWFGDSIALPQHL 429

Query: 456 QISTMRTLETGRPMLRATNTGATAVILPGGAT-SELAPYTRGVLAGQVQGYGGQTPYILL 514
           QIS MR LETGRPMLR+TNTGATA+I P G   ++L P+ R VL   VQGY G TPY+ +
Sbjct: 430 QISQMRALETGRPMLRSTNTGATAIIGPDGKVQAQLKPFERNVLTASVQGYRGITPYVAV 489

Query: 515 GNKLIV 520
           GN  IV
Sbjct: 490 GNAFIV 495


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.140    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,311,097
Number of extensions: 57827
Number of successful extensions: 250
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 246
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 1,221,021
Length adjustment: 88
Effective length of query: 453
Effective length of database: 895,685
Effective search space: 405745305
Effective search space used: 405745305
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 132 (55.5 bits)