BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0670.p
         (260 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979807|ref|YP_001352110.1| dimethyladenosine transferase [...   427   e-121

>gi|152979807|ref|YP_001352110.1| dimethyladenosine transferase
           [Janthinobacterium sp. Marseille]
          Length = 255

 Score =  427 bits (1099), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/255 (80%), Positives = 229/255 (89%)

Query: 1   MKHIPRKRFGQNFLTDDVVLHDIISSIAPAADDAMVEIGPGLAAMTELLLEQARHLHVVE 60
           MKHIPRKRFGQNFLTDD VL++II +I P   D MVEIGPGLAAMT LLLE  + +HVVE
Sbjct: 1   MKHIPRKRFGQNFLTDDTVLYNIIRAIDPQPQDTMVEIGPGLAAMTRLLLEGVQQMHVVE 60

Query: 61  LDRDLVERLKKRFDPTRLTVHSADALKFDFASIPVPAGRKLRVVGNLPYNISSPLLFHLA 120
           LDRDLVERLKK FDP RL +HSADAL+FDF++IPVPAG KLRVVGNLPYNISSPLLFHLA
Sbjct: 61  LDRDLVERLKKSFDPKRLIIHSADALQFDFSTIPVPAGSKLRVVGNLPYNISSPLLFHLA 120

Query: 121 EIAPQVQDQHFMLQKEVVERMVAEPGSKVYGRLSVMLQWRYDMELLFVVPPTAFDPPPKV 180
           E+AP VQDQHFMLQKEVVERMVAEPGSKVYGRLSVMLQWRY MEL+FVVPPTAFDPPP+V
Sbjct: 121 EMAPHVQDQHFMLQKEVVERMVAEPGSKVYGRLSVMLQWRYHMELMFVVPPTAFDPPPRV 180

Query: 181 DSAIVRMIPLAQPMACEQALLEKVVTQAFSQRRKVIRNCLAGLFSEEELRQVGVDPQARP 240
           +SAIVRMIPLAQP+ C+QA LE+VV +AFSQRRKVIRNCLAG+F+E +L +VG+DPQ RP
Sbjct: 181 ESAIVRMIPLAQPLPCDQAKLEQVVLKAFSQRRKVIRNCLAGMFAESDLLEVGIDPQLRP 240

Query: 241 ETVPVQQFVALAQLL 255
           ET+P+ Q+VALA  L
Sbjct: 241 ETIPLAQYVALANRL 255


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.137    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 526,684
Number of extensions: 19622
Number of successful extensions: 78
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 179
Effective length of database: 921,564
Effective search space: 164959956
Effective search space used: 164959956
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 128 (53.9 bits)