BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0657.p
         (162 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982175|ref|YP_001352064.1| MutT/NUDIX family hydrolase [Ja...   203   4e-54

>gi|152982175|ref|YP_001352064.1| MutT/NUDIX family hydrolase
           [Janthinobacterium sp. Marseille]
          Length = 162

 Score =  203 bits (517), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 102/155 (65%), Positives = 119/155 (76%), Gaps = 1/155 (0%)

Query: 1   MSEVWKPSVTVAAIIERDGRFLMVEEHSAGGLRINQPAGHLEPGESLIEAAVREALEESA 60
           M ++WKPSVTVAAIIERDG FL+VEE ++ G+R NQPAGHL+P ESL EA VRE LEE+A
Sbjct: 1   MPDIWKPSVTVAAIIERDGYFLLVEEETSEGVRFNQPAGHLDPHESLEEAVVRETLEETA 60

Query: 61  HVFTPTALVGTYLSRNVSSSRGGMSVTYLRFAFAGTVGVALQRPLDAGIVRALWMSRAEL 120
           H FTPTALVG Y+SR V S+R G  VTYL F F G VG    +PLD GI+RA+WMS  EL
Sbjct: 61  HDFTPTALVGMYMSRYV-SARTGHDVTYLSFTFCGEVGAKHDQPLDVGILRAVWMSYDEL 119

Query: 121 AACAERHRSPLVLRCVDDYLRGQRAPLELVHTDPS 155
            A  E+HRSP VL+ VDDYL G+RAPL L+ T PS
Sbjct: 120 VATREKHRSPSVLQRVDDYLAGKRAPLSLLITHPS 154


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 398,923
Number of extensions: 15494
Number of successful extensions: 56
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 55
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 86
Effective length of database: 940,049
Effective search space: 80844214
Effective search space used: 80844214
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)