BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0649.p
         (159 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980661|ref|YP_001352052.1| bacterioferritin (cytochrome b1...   278   9e-77
gi|152980645|ref|YP_001352051.1| bacterioferritin (cytochrome b1...   259   4e-71

>gi|152980661|ref|YP_001352052.1| bacterioferritin (cytochrome b1)
           [Janthinobacterium sp. Marseille]
          Length = 157

 Score =  278 bits (712), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 136/154 (88%), Positives = 141/154 (91%)

Query: 1   MKGDPAVIKLLNAQLTNELTAINQYFLHARMYKHWGLDKIGAKEYAESIGEMKHADKLID 60
           MKGD  +IKLLNAQLTNELTAINQYFLHARMYKHWG +KI  KEY ESIGEMKHADKLID
Sbjct: 1   MKGDSNIIKLLNAQLTNELTAINQYFLHARMYKHWGFEKIAKKEYEESIGEMKHADKLID 60

Query: 61  RILMLDGLPNLQALHKLMIGENTQEMLQCDLKLEQGAQKTVKEGIATCEQHGDYVSRELF 120
           RILMLDGLPNLQALHKLMIGENT EML CDLKLE+ AQKTVKEGIA CE  GDYVSRELF
Sbjct: 61  RILMLDGLPNLQALHKLMIGENTPEMLGCDLKLEKLAQKTVKEGIAACEASGDYVSRELF 120

Query: 121 QMILDDTEEHIDWLETQLDLIDKVGIQNYLQSQM 154
           Q ILDDTEEHIDWLETQLDLI+KVGIQNYLQ+QM
Sbjct: 121 QYILDDTEEHIDWLETQLDLIEKVGIQNYLQAQM 154


>gi|152980645|ref|YP_001352051.1| bacterioferritin (cytochrome b1)
           [Janthinobacterium sp. Marseille]
          Length = 158

 Score =  259 bits (663), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 124/154 (80%), Positives = 136/154 (88%)

Query: 1   MKGDPAVIKLLNAQLTNELTAINQYFLHARMYKHWGLDKIGAKEYAESIGEMKHADKLID 60
           MKGD  +I+LLNAQLTNELTAINQYFLHARMYKHWG +KI  KE+ ESIGEMKHADKLID
Sbjct: 1   MKGDSNIIRLLNAQLTNELTAINQYFLHARMYKHWGFEKIAKKEFEESIGEMKHADKLID 60

Query: 61  RILMLDGLPNLQALHKLMIGENTQEMLQCDLKLEQGAQKTVKEGIATCEQHGDYVSRELF 120
           RILMLDGLPNLQALHKL+IGEN +EML+ DLKLE+ AQ TVKEGIA  E  GDYVSRELF
Sbjct: 61  RILMLDGLPNLQALHKLLIGENIREMLESDLKLEKLAQATVKEGIAASETSGDYVSRELF 120

Query: 121 QMILDDTEEHIDWLETQLDLIDKVGIQNYLQSQM 154
             ILDDTEEHIDWLETQL LI+ +G+QNYLQ+QM
Sbjct: 121 HYILDDTEEHIDWLETQLSLIETIGLQNYLQAQM 154


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.134    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 354,848
Number of extensions: 13120
Number of successful extensions: 47
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 47
Number of HSP's successfully gapped: 2
Length of query: 159
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 83
Effective length of database: 940,049
Effective search space: 78024067
Effective search space used: 78024067
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)