BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0648.p
         (204 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980248|ref|YP_001352050.1| glutathione S-transferase [Jant...   314   2e-87
gi|152979819|ref|YP_001353291.1| Gst glutathione S-transferase [...   101   4e-23
gi|152981689|ref|YP_001354958.1| stringent starvation protein A ...    62   3e-11

>gi|152980248|ref|YP_001352050.1| glutathione S-transferase
           [Janthinobacterium sp. Marseille]
          Length = 203

 Score =  314 bits (805), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 149/201 (74%), Positives = 170/201 (84%)

Query: 2   LKLIGSNASPFVRKVRVVMAEKKIDYEFILEDVWSASTTIQESNPLGKVPCLLMDDGGAM 61
           +KLIGS ASP+VRKVRVVM EKKIDY+F+LE+VW A TTIQESNPLGKVPCL+M+DGGAM
Sbjct: 1   MKLIGSLASPYVRKVRVVMLEKKIDYDFVLENVWGAETTIQESNPLGKVPCLVMEDGGAM 60

Query: 62  FDSRVIVEYLDTLTPVGKLLPPNGRERAEIKCWEALADGTLDAAVLVRLEKTLRPTKQQS 121
           FDSRVIVEYLDTLTPVGKL+PPNGRERAE+KCWEALADG  DAA+L+RLE TLRP +Q+S
Sbjct: 61  FDSRVIVEYLDTLTPVGKLIPPNGRERAEVKCWEALADGVADAAMLLRLEHTLRPAEQRS 120

Query: 122 PEWIKRQWSKVEASLKAMADGLGEKPFCVGNHYTLADVAVCCALGWLAFRFPDLAWREDY 181
             WI RQ  KV   LKAM+ GL +  FC GN YTLADVAV C L WL+FRFP++ WR DY
Sbjct: 121 QAWIDRQSRKVHDGLKAMSVGLKDTAFCAGNQYTLADVAVGCVLEWLSFRFPEITWRTDY 180

Query: 182 PQLARLFDKVSERVSFKETVP 202
           P L +L +K+SER SFKETVP
Sbjct: 181 PNLEKLLEKLSERPSFKETVP 201


>gi|152979819|ref|YP_001353291.1| Gst glutathione S-transferase
           [Janthinobacterium sp. Marseille]
          Length = 201

 Score =  101 bits (251), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 5/202 (2%)

Query: 2   LKLIGSNASPFVRKVRVVMAEKKIDYEFIL--EDVWSASTTIQESNPLGKVPCLLMDDGG 59
           ++L+ +  SP+ R  R+V  EK    + +L   D W+    + + NP+ +VP L+ DDG 
Sbjct: 1   MELLLNRTSPYARIARIVALEKGCANKLVLVWSDPWNEDARLLQHNPVRRVPVLVTDDGQ 60

Query: 60  AMFDSRVIVEYLDTLTPVGKLLPPNGRERAEIKCWEALADGTLDAAVLVRLEKTLRPTKQ 119
           ++ +S +I  YLD++    KLLPP     AEI      A G +DAA    + +     + 
Sbjct: 61  SITESLLIALYLDSVGSGDKLLPPE--RYAEILQLTGWAQGLIDAAFTTMITRKHHGKEI 118

Query: 120 QSPEWIKRQWSKVEASLKAMADGLGEKPFCVGNHYTLADVAVCCALGWLAFRFPDLAWRE 179
                 +R+   +E +L A+            N  TLAD+ +  AL +++FR P++ W++
Sbjct: 119 DDSVLGQRRLQAIERTLPALNTAYAAS-LPAANAVTLADIVIAVALDYISFRLPEVEWQD 177

Query: 180 DYPQLARLFDKVSERVSFKETV 201
            YP L+ L  ++ +R SF  TV
Sbjct: 178 KYPALSALRTRMLQRDSFSSTV 199


>gi|152981689|ref|YP_001354958.1| stringent starvation protein A
           [Janthinobacterium sp. Marseille]
          Length = 203

 Score = 61.6 bits (148), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 1   MLKLIGSNASPFVRKVRVVMAEKKIDYEFILEDVWSASTTIQESNPLGKVPCLLMDDGGA 60
           M+ L      PF ++ R+V+ EK +D+E    D+++    I   NP G+VP L+  D   
Sbjct: 1   MMVLYSGTTCPFSQRCRLVLFEKGMDFEVRDVDLFNKPEDISTMNPYGQVPILVERD-LI 59

Query: 61  MFDSRVIVEYLDTLTPVGKLLP--PNGRERAEIKCWEALADGTLDAAVLVRLEKTLRPTK 118
           +++S +I EY+D   P  +L+P  P  R RA +  +        +  + + +  TL   K
Sbjct: 60  LYESNIINEYIDERFPHPQLMPADPLMRARARLMLF------NFEKELFIHVH-TLENDK 112

Query: 119 QQSPEWIK-RQWSKVEASLKAMADGLGEKPFCVGNHYTLADVAVCCAL 165
            +S E I+ +  +++   L  +A    +  + +G+ +++ DVA+   L
Sbjct: 113 GRSGEKIQEKARNEIRDRLTTLAPLFLKNKYMLGDEFSMLDVAIAPLL 160


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 494,272
Number of extensions: 19409
Number of successful extensions: 61
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 3
Length of query: 204
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 125
Effective length of database: 928,958
Effective search space: 116119750
Effective search space used: 116119750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)