BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0593.p
         (161 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979901|ref|YP_001354565.1| 2-amino-4-hydroxy-6-hydroxymeth...   159   7e-41

>gi|152979901|ref|YP_001354565.1|
           2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
           pyrophosphokinase [Janthinobacterium sp. Marseille]
          Length = 160

 Score =  159 bits (403), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 94/154 (61%), Positives = 117/154 (75%)

Query: 8   AWIGIGGNLGDARATVEQAIARLATLPQSRLLARSSLYRTAPIDSSGDDYVNAVALISTT 67
           A+I IG NLGDAR  V  A+ +L  L  +RLLA+SSL+RTAPIDSSGDDY+NAVA +ST+
Sbjct: 6   AYIAIGSNLGDARDHVLYALRQLDQLASTRLLAQSSLFRTAPIDSSGDDYINAVASVSTS 65

Query: 68  LPALELLHALQAIELQHGRERPYRNAPRTLDLDLLMYGDHILTSEELILPHPRMAQRAFV 127
           L A ELL AL A+E   GRERPY NAPRTLDLDLL+YGD ++ ++ L +PHPRM  RAFV
Sbjct: 66  LSAEELLRALLALEQTRGRERPYFNAPRTLDLDLLLYGDAVINTDTLTVPHPRMTSRAFV 125

Query: 128 LVPMLEIDETVEIAGLGPARHFLKEITEQPISRL 161
           L+P+L+ID  V+I GLG A  F   + +Q IS+L
Sbjct: 126 LIPLLQIDPFVQIPGLGAAHQFAPAVADQAISKL 159


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.136    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 384,951
Number of extensions: 14606
Number of successful extensions: 57
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 85
Effective length of database: 940,049
Effective search space: 79904165
Effective search space used: 79904165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)