BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0481.p
         (119 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981705|ref|YP_001354319.1| NADPH-dependent FMN reductase [...   125   6e-31
gi|152981880|ref|YP_001355119.1| arsenate reductase [Janthinobac...    66   7e-13

>gi|152981705|ref|YP_001354319.1| NADPH-dependent FMN reductase
           [Janthinobacterium sp. Marseille]
          Length = 378

 Score =  125 bits (315), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 78/114 (68%)

Query: 6   ITIYHNPKCGTSRNVLQGLRDGGVEPTIIEYLKNPPDRATLTGLIAAMGVPVREVVRSKE 65
           + I+HNP CGTSRN L  +R   +EP I+EYL+ PP R  L+ +I   G+ VR+ +R K 
Sbjct: 3   VKIFHNPDCGTSRNTLALIRHLDIEPEIVEYLRTPPARDELSLMIKNAGLTVRDALRKKG 62

Query: 66  ALYQELGLDAATVSDEQLIDAMLAHPVLINRPIVVTPKGTMLVRPSERLAEIFP 119
             Y ELGLD   + D+ L+DAM+AHP+LINRP V+TP GT L RPSE + ++ P
Sbjct: 63  TPYAELGLDDPALGDDALLDAMIAHPILINRPFVITPVGTRLCRPSELVLDLLP 116


>gi|152981880|ref|YP_001355119.1| arsenate reductase
           [Janthinobacterium sp. Marseille]
          Length = 123

 Score = 65.9 bits (159), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 12/122 (9%)

Query: 6   ITIYHNPKCGTSRNVLQGLRDG-----GVEPTIIEYLKNPPDRATLTGLIAAM----GVP 56
           +TIYHNP+C  SR  L  L +      G+E  +++Y K P +R  L  L   +     V 
Sbjct: 2   LTIYHNPRCSKSRETL-ALTEAFAAQHGLELNVVDYQKTPLNRQQLAELHQVLQSEGAVS 60

Query: 57  VREVVRSKEALYQELGLDAATVSDEQLIDAMLAHPVLINRPIVVTPKGTMLVRPSERLAE 116
           V  +VR  E  +  L L  A  +D QL+DA+ +HP L+ RPIV   +   + RP E +  
Sbjct: 61  VTAMVRDNEDEFSALQLSNA--NDAQLLDALASHPKLLQRPIVRFNQRAAIGRPPELVKA 118

Query: 117 IF 118
           I 
Sbjct: 119 IL 120


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.136    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 270,914
Number of extensions: 10229
Number of successful extensions: 46
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 44
Number of HSP's successfully gapped: 2
Length of query: 119
Length of database: 1,221,021
Length adjustment: 72
Effective length of query: 47
Effective length of database: 954,837
Effective search space: 44877339
Effective search space used: 44877339
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 124 (52.4 bits)