BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0477.p
         (107 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981948|ref|YP_001354623.1| hypothetical protein mma_2933 [...   155   3e-40
gi|152981935|ref|YP_001354911.1| rhodanese-related sulfurtransfe...    62   6e-12

>gi|152981948|ref|YP_001354623.1| hypothetical protein mma_2933
           [Janthinobacterium sp. Marseille]
          Length = 107

 Score =  155 bits (393), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 83/107 (77%)

Query: 1   MEHISAPELAAWINDPDRPTPLLLDVREPWEHQTCHIAGVQLVPMNTIPGRFSEFDEEQP 60
           M+H++APELAA I  P+   P LLDVREPWE+QTC I G   +PMNTIPG+  + D   P
Sbjct: 1   MQHLTAPELAALIATPEGAAPYLLDVREPWEYQTCKIEGSVSIPMNTIPGQLEQLDRNAP 60

Query: 61  VVCICHHGGRSMQVAAFLERQGFSKVINLSGGVHAWASQVDPSMPTY 107
           +VCICHHG RS++VA FLE  GFS+V NL+GGVHAWA QVDP+MPTY
Sbjct: 61  IVCICHHGARSLRVAHFLEANGFSRVTNLTGGVHAWAQQVDPAMPTY 107


>gi|152981935|ref|YP_001354911.1| rhodanese-related
           sulfurtransferase [Janthinobacterium sp. Marseille]
          Length = 133

 Score = 62.4 bits (150), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 17  DRPTPLLLDVREPWEHQTCHIAGVQLVPMNTIPGRFSEFDE--EQPVVCICHHGGRSMQV 74
           ++   L+LDVR   ++   HI   + +P+  + GR +E ++   +PV+ +C  G +S + 
Sbjct: 43  NQGKTLILDVRPAADYAAGHIRDAKNIPLKELKGRVAELEKFKARPVIVVCSKGLQSNKA 102

Query: 75  AAFLERQGFSKVINLSGGVHAWASQVDP 102
            A L+++GF++  +L GG+ AW SQ  P
Sbjct: 103 TALLKKEGFTEATSLLGGLDAWQSQGLP 130


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.136    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 294,236
Number of extensions: 10939
Number of successful extensions: 26
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 2
Length of query: 107
Length of database: 1,221,021
Length adjustment: 70
Effective length of query: 37
Effective length of database: 962,231
Effective search space: 35602547
Effective search space used: 35602547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 123 (52.0 bits)