BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0468.p
         (459 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981058|ref|YP_001354633.1| phosphomannomutase [Janthinobac...   775   0.0  
gi|152980851|ref|YP_001353925.1| phosphoglucomutase/phosphomanno...   117   2e-27

>gi|152981058|ref|YP_001354633.1| phosphomannomutase
           [Janthinobacterium sp. Marseille]
          Length = 458

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/455 (79%), Positives = 409/455 (89%)

Query: 5   LSASIFKAYDIRGIIDKTLDDQVAFQIGQAFGAAALAKGQKKVVIGRDGRLSGPSLSAAL 64
           LS SIFKAYDIRGII  TLD  VA  IG+AFG+A  AKG++ VV+GRDGRLSGP L+ AL
Sbjct: 4   LSQSIFKAYDIRGIIGSTLDADVARDIGRAFGSAVRAKGEQVVVLGRDGRLSGPELATAL 63

Query: 65  AKGLQAVGVDVIDLGMVATPMVYFGTHVLDTQSGIMVTGSHNPPDYNGFKMVLAGEAIHG 124
           A+G+Q VG+DV+DLG+VATPM+YFGTHVLD QSGIMVTGSHNPPDYNGFKMVLAGEAI+G
Sbjct: 64  AEGMQEVGIDVVDLGVVATPMLYFGTHVLDAQSGIMVTGSHNPPDYNGFKMVLAGEAIYG 123

Query: 125 ETIQALYQAIVKGEFPQGNGSYSTHDIKDAYISRMISDVKLARPLKIAVDCGNGVAGAFA 184
           +TIQALYQAIV  EF  G GSY T+DI D Y  R++SDVKL RP+KIA+DCGNGVAGAFA
Sbjct: 124 DTIQALYQAIVNKEFADGKGSYRTYDIADGYQKRIVSDVKLTRPMKIAIDCGNGVAGAFA 183

Query: 185 ADIYRALGCEVTELFCEVDGNFPNHHPDPAHPENLQDLIRCLQETDNELGLAFDGDGDRL 244
            D+YRA+GC+V ELFCEVDG FPNHHPDPAHPENLQDLIRCLQ TD E+GLAFDGDGDRL
Sbjct: 184 GDLYRAMGCDVIELFCEVDGTFPNHHPDPAHPENLQDLIRCLQTTDAEIGLAFDGDGDRL 243

Query: 245 GLVTKDGQIIYPDRQLMLFAEDVLTRNPGKEILYDVKCTRHLAPWITARGGQPLMWKTGH 304
           GLVTKDGQIIYPDRQLMLFA+DVLTR+PG++ILYDVKCTRHLAPWIT RGG+PLMWKTGH
Sbjct: 244 GLVTKDGQIIYPDRQLMLFAQDVLTRHPGEQILYDVKCTRHLAPWITERGGKPLMWKTGH 303

Query: 305 SLVKAKLRETGAPLGGEMSGHIFFKDRWFGFDDGLYAGVRMLELMARQSDPSAVLNALPQ 364
           SLVKAK+RETGAPLGGEMSGH+FFKDRW+GFDDG+YAG RMLEL++R+ DPSAVLNALPQ
Sbjct: 304 SLVKAKMRETGAPLGGEMSGHVFFKDRWYGFDDGMYAGARMLELLSREKDPSAVLNALPQ 363

Query: 365 SVSTPELQLKLQEGENFALIGKLQSEAKFEGAQDIITIDGLRVEYADGFGLARSSNTTPV 424
           SVSTPELQLKL+EGE+F LI KLQ EA+F G+  IITIDGLRVEY DGFGLARSSNTTPV
Sbjct: 364 SVSTPELQLKLKEGESFPLIAKLQREAQFPGSDQIITIDGLRVEYPDGFGLARSSNTTPV 423

Query: 425 VVLRFEAETPQALERIQGEFRKVILAARPDVTLPF 459
           +V+RFEAE+  AL+ IQ EF++VILAA+PD  LP+
Sbjct: 424 IVMRFEAESQAALQHIQAEFKRVILAAKPDAVLPY 458


>gi|152980851|ref|YP_001353925.1|
           phosphoglucomutase/phosphomannomutase [Janthinobacterium
           sp. Marseille]
          Length = 445

 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 183/417 (43%), Gaps = 26/417 (6%)

Query: 26  QVAFQIGQAFGAAALAKGQKKVVIGRDGRLSGPSLSAALAKGLQAVGVDVIDLGMVATPM 85
           ++ +  G     +  A  +  V+IG+D R+SG  L AAL  G  A GVDV+  G + TP 
Sbjct: 27  RLGYAAGTVLTKSRKASSRPVVLIGKDTRISGYMLEAALEAGFSAAGVDVMLAGPMPTPA 86

Query: 86  VYFGTHVLDTQSGIMVTGSHNPPDYNGFKMVLAG-----EAIHGETIQALYQAIVKGEFP 140
           + + T  L   +G++++ SHNP + NG K   A      +AI  E   AL + +      
Sbjct: 87  IAYLTRALRLSAGVVISASHNPYEDNGIKFFSASGNKLPDAIELEIEAALNEPMSCVASE 146

Query: 141 QGNGSYSTHDIKDAYI----SRMISDVKLARPLKIAVDCGNGVAGAFAADIYRALGCEVT 196
           +   +    D +  YI    S   +++ L R  K+ VDC +G A   A D++  LG EV 
Sbjct: 147 KLGRAKRLDDARGRYIEFCKSTFPNELDL-RGTKLVVDCAHGAAYHIAPDVFHELGAEVI 205

Query: 197 ELFCEVDGNFPNHHPDPAHPENLQDLIRCLQETDNELGLAFDGDGDRLGLVTKDGQIIYP 256
            +  + +G   N       P  L + +R  Q     LG+A DGD DRL +V   G++   
Sbjct: 206 AIGNQPNGFNINEGYGATAPAALVEAVRANQA---HLGIALDGDADRLLVVDAAGRVYNG 262

Query: 257 DRQLMLFAEDVLTRNPGKEILYDVKCTRHLAPWITARGGQPLMWKTGHSLVKAKLRETGA 316
           D  L +  +D +   P +  +  +     L       G        G   V   LRE G 
Sbjct: 263 DELLYIMVKDRMRVRPIEGAVGTLMTNMALEVAFKEMGVGFARANVGDRYVLEVLRERGW 322

Query: 317 PLGGEMSGHIFFKDRWFGFDDGLYAGVRMLELMARQSDPSAVLNALPQSVSTPELQLKLQ 376
            +GGE SGH+   D+     DG+ + +++L  + R     A L    +      + +K++
Sbjct: 323 QVGGEGSGHMLCLDK-HTTGDGIVSALQILSALKRSGLSLAELTQDIEMFPQTLINVKVE 381

Query: 377 EGENFALIGKLQSEAKFEGAQDIITIDGLRVEYAD-GFGLARSSNTTPVVVLRFEAE 432
            G ++    +L +E            + +  E  D G  L R+S T P++ +  EA+
Sbjct: 382 PGFDWKKNKELLAEK-----------EAVEAELGDKGRVLIRASGTEPLIRVMVEAK 427


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.139    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,101,591
Number of extensions: 48871
Number of successful extensions: 132
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 2
Length of query: 459
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 373
Effective length of database: 903,079
Effective search space: 336848467
Effective search space used: 336848467
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)