BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0455.p (429 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980457|ref|YP_001355073.1| ABC-2 type transport system ATP... 91 2e-19 gi|152981146|ref|YP_001354830.1| cell division ATP-binding prote... 80 2e-16 gi|152981231|ref|YP_001353367.1| ABC-type transport systems, ATP... 80 3e-16 gi|152982233|ref|YP_001351723.1| ABC-type polar amino acid trans... 77 1e-15 gi|152980901|ref|YP_001351950.1| ABC transporter ATP-binding pro... 75 1e-14 >gi|152980457|ref|YP_001355073.1| ABC-2 type transport system ATP-binding protein [Janthinobacterium sp. Marseille] Length = 310 Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 13/213 (6%) Query: 38 GAWALQDISFNVGRGEAVAIIGRNGGGKSTLLEILTGTLSPSSGSV------------KV 85 G + +SF + RGE ++G NG GK+T L + G +P SGS+ + Sbjct: 22 GTKVIDGLSFALRRGECYGLLGPNGAGKTTTLRLCLGLTAPDSGSITLVDHAIPAHAREA 81 Query: 86 NGRVAALLELGSGFNPEYSGRDNVMLNGLLLGLTREEILGRFSEIEAFAEIGAAIDRPVK 145 RV + + G +P+++ +N+++ G G+ + I R + FA + D + Sbjct: 82 RARVGVVPQ-GDNLDPDFTVEENLLVFGRYFGIPDKTIQARIPSLLEFANLTNKKDAQIG 140 Query: 146 TYSSGMLMRLAFAVQVLARPDILIVDEALGVGDFFFQQKCLDYIKRLLANGTTLLFVSHD 205 S GM RL A ++ PD++ +DE D + + +K LLA G T+ +H Sbjct: 141 ELSGGMRRRLTLARALVNDPDLIFMDEPTTGLDPQARHMIWERLKALLARGKTIFLTTHF 200 Query: 206 MGTVRDICQRVIYLKKGELIFDGATNDGVALYF 238 M +C R+ + G+LI +G+ + +A + Sbjct: 201 MDEAERLCDRLAVMDYGKLIAEGSPRELIAQHI 233 >gi|152981146|ref|YP_001354830.1| cell division ATP-binding protein FtsE [Janthinobacterium sp. Marseille] Length = 227 Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 18/205 (8%) Query: 37 EGAWALQDISFNVGRGEAVAIIGRNGGGKSTLLEILTGTLSPSSGSVKVNGRVAALLE-- 94 + AL DIS +VG+GE V + G +G GKSTLL+++ PS GSV V+G + ++ Sbjct: 13 QNVTALSDISLSVGKGELVFLAGPSGAGKSTLLKLIAAMERPSEGSVIVSGHDISRIKTS 72 Query: 95 --------LGSGFNPEYSGRD-----NVMLNGLLLGLTREEILGRF-SEIEAFAEIGAAI 140 LG F + D NVML ++ G +R + R + ++ + A Sbjct: 73 GLPYLRRNLGLIFQQQRLLADRSVLANVMLPLIVCGASRPDAERRARAALDKVGLLDMAS 132 Query: 141 DRPVKTYSSGMLMRLAFAVQVLARPDILIVDEALGVGDFFFQQKCLDYIKRLLANGTTLL 200 P+ T S G R+A A ++ RP I++ DE D K LD +K + G T L Sbjct: 133 SGPL-TLSGGEQQRVAIARAIVNRPQIILADEPTANLDRAAANKVLDALKAFHSVGVTCL 191 Query: 201 FVSHDMGTVRDICQRVIYLKKGELI 225 +HD + D RVIYL G +I Sbjct: 192 ISTHDEQFL-DTATRVIYLDHGRII 215 >gi|152981231|ref|YP_001353367.1| ABC-type transport systems, ATPase component [Janthinobacterium sp. Marseille] Length = 511 Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 19/212 (8%) Query: 24 SLFKRFRGKSAPDEGAWALQDISFNVGRGEAVAIIGRNGGGKSTLLEILTGTLSPSSGSV 83 S+ KR+ A D I+ +V GE A++G NG GKSTL++I+ G++ P +G V Sbjct: 9 SITKRYPSVVAND-------GINLSVKPGEIHAVLGENGAGKSTLMKIIYGSVKPDAGKV 61 Query: 84 KVNGR------VAALLELGSGFN-PEYSGRDNV-MLNGLLLGLTR----EEILGRFSEIE 131 NG+ A ELG +S D + ++ + LGL +E+ R S+ Sbjct: 62 LWNGKEVHIANPAMARELGIAMVFQHFSLFDTLTVVENIALGLPHDTKLDELARRISDTA 121 Query: 132 AFAEIGAAIDRPVKTYSSGMLMRLAFAVQVLARPDILIVDEALGVGDFFFQQKCLDYIKR 191 + R V T S G R+ +LA+P +LI+DE V +K + +++ Sbjct: 122 EQYGLELEPQRHVHTLSVGECQRVEIVRALLAKPQLLILDEPTSVLTPQAVEKLFETLRK 181 Query: 192 LLANGTTLLFVSHDMGTVRDICQRVIYLKKGE 223 L A G ++L++SH + +R +C ++ G+ Sbjct: 182 LAAEGCSILYISHKLDEIRALCDTCTVVRAGK 213 >gi|152982233|ref|YP_001351723.1| ABC-type polar amino acid transport system, ATPase component [Janthinobacterium sp. Marseille] Length = 243 Score = 77.4 bits (189), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 19/210 (9%) Query: 40 WALQDISFNVGRGEAVAIIGRNGGGKSTLLEILTGTLSPSSGSVKVNGRVAALLELG--- 96 L+ I +V GE +AIIG++G GKSTLL + G S GS+ V G EL Sbjct: 17 QVLKGIRMDVEPGEVIAIIGKSGSGKSTLLRCINGLESIDEGSISVAGSHLGKSELELRN 76 Query: 97 ---------SGFN--PEYSGRDNVMLNGLLL-GLTREEILGRFSEIEAFAEIGAA--IDR 142 FN P S N+M++ +++ G++ ++ R ++ ++G + D Sbjct: 77 LRLKVGMIFQQFNLFPHLSVGRNIMISPMIVKGVSEKD--ARALAMKNLEKVGLSEKFDS 134 Query: 143 PVKTYSSGMLMRLAFAVQVLARPDILIVDEALGVGDFFFQQKCLDYIKRLLANGTTLLFV 202 S G R+A A + P L+ DE D + L+ ++ L G TL+ V Sbjct: 135 FPDQLSGGQQQRVAIARALSMEPQALLCDEVTSALDPELVNEVLNVVRGLAHEGMTLIMV 194 Query: 203 SHDMGTVRDICQRVIYLKKGELIFDGATND 232 +H+M R++C RV+++ +G++ GA D Sbjct: 195 THEMRFAREVCDRVVFMHQGKVHEIGAPED 224 >gi|152980901|ref|YP_001351950.1| ABC transporter ATP-binding protein [Janthinobacterium sp. Marseille] Length = 579 Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 24/214 (11%) Query: 41 ALQDISFNVGRGEAVAIIGRNGGGKSTLLEILTGTLSPSSGSVKVNGRVAALLELG---- 96 A+ ++SF + +GE V I+G +G GK+TL ++ G +P+ G+V++ +V + L Sbjct: 322 AVSEVSFALRKGETVGIVGESGSGKTTLTRMVLGLETPNVGNVRLRDQVWSDLSDAQQRA 381 Query: 97 -------------SGFNPEYSGRDNVMLNGL-LLGLT-REEILGRFSEIEAFAEIGAAI- 140 + F+P Y+ + V+ L + G T E+ R E+ + + Sbjct: 382 ERKRIQVVFQDPLASFDPRYTV-ERVLFEALGVAGYTDTEKTRARAIELLHLVRLDQSYL 440 Query: 141 -DRPVKTYSSGMLMRLAFAVQVLARPDILIVDEALGVGDFFFQQKCLDYIKRLLAN-GTT 198 RP++ S G R+A A + P++LI DE + D Q + LD + L G + Sbjct: 441 QRRPIE-LSGGQRQRIAIARALAPEPEVLICDEPVSALDVSVQAQILDLLIDLKDRLGLS 499 Query: 199 LLFVSHDMGTVRDICQRVIYLKKGELIFDGATND 232 LF+SHD+G + + R++ +K G ++ G + Sbjct: 500 CLFISHDLGVIYRVSDRILVMKDGIVVESGGVRE 533 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.320 0.137 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,005,879 Number of extensions: 43828 Number of successful extensions: 283 Number of sequences better than 1.0e-08: 35 Number of HSP's gapped: 254 Number of HSP's successfully gapped: 37 Length of query: 429 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 343 Effective length of database: 903,079 Effective search space: 309756097 Effective search space used: 309756097 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)