BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0443.p (343 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [... 132 4e-32 gi|152981998|ref|YP_001351914.1| hypothetical protein mma_0224 [... 117 1e-27 gi|152979928|ref|YP_001352913.1| vanillate monooxygenase, alpha ... 103 2e-23 gi|152981999|ref|YP_001353364.1| hypothetical protein mma_1674 [... 78 9e-16 gi|152981877|ref|YP_001355367.1| hypothetical protein mma_3677 [... 75 9e-15 >gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [Janthinobacterium sp. Marseille] Length = 354 Score = 132 bits (331), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/335 (28%), Positives = 157/335 (46%), Gaps = 11/335 (3%) Query: 7 KVLRKFWYALMPVTQLKDGPQPFTLLGEKLVVWLKEDGSPAALQDRCCHRTARLSKGFVE 66 + LR+FW+ + ++L D P TLL + LV+ + +G AL RC H+ L+ G + Sbjct: 24 RALRRFWHPVAYASELGDTPLAVTLLDQSLVL-ARLNGVVTALDSRCPHKGTSLALGQIV 82 Query: 67 NGNIVCGYHGWTFNGEGACVRVPQSVDGSVPSGACVKSYFCKERYGYVWVALEEPLRDIP 126 +G I C YHGW ++ G CVRVP + A V Y E G +WVALEEPL P Sbjct: 83 DGTIECPYHGWRYDDGGKCVRVPAREELCDVLKASVAKYHAAEHVGIIWVALEEPLYAFP 142 Query: 127 EFPEDGAPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRATFGLYDQPKPEKYEI-E 185 +FPE Y + W TS+ R +EN D +HFS+VH T G P+ E ++ Sbjct: 143 DFPEFEDAEYNVLQGTSYDWATSSPRRLENFVDFAHFSFVHDGTIGSRSNPRVEPVDVWR 202 Query: 186 ETDYGFEAETRVPIKNVPASHRVTGSTADTTVRHMFNRWY--LPFVRRFGCTYPESGRHH 243 E + V V + G T D + + N ++ +P +P +G+ + Sbjct: 203 EGPVLRFNRSGVKEPGVGLKKELLGIT-DALIEPV-NEYHVTMPHTVHLKRIFP-NGKRY 259 Query: 244 IIYNCATPIDDGAIMLSQWLYRNDTEEQCSEAELIAWDAPILVEDREILEATDP----DA 299 +++ A+P+ W+ R+ + +A ++ +L +D+ I+E+ P A Sbjct: 260 VLFMSASPVTATQTRSFWWIARDFGTDTKHDAFFRDFEDEVLGQDKPIIESQRPLWFNLA 319 Query: 300 CIDVRRRQEFHMASDRPGLIMRRMLLQLLEEHGES 334 D +R+ +D + RR L +L+ +S Sbjct: 320 GGDPAQRETPMRGADVVTIEYRRWLFELMNAKPKS 354 >gi|152981998|ref|YP_001351914.1| hypothetical protein mma_0224 [Janthinobacterium sp. Marseille] Length = 365 Score = 117 bits (293), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 143/311 (45%), Gaps = 27/311 (8%) Query: 2 LVTQQKVLRKFWYALMPVTQLKD---------GPQPFTLLGEKLVVWLKEDGSPAALQDR 52 L+ + LR FW+ PV LK+ GP LLGE +V+ K DG AA++DR Sbjct: 6 LLADKSYLRHFWH---PVCTLKEFTESAPEGVGPMAVKLLGEDIVL-AKLDGRIAAMRDR 61 Query: 53 CCHRTARLSKGFVENGN----IVCGYHGWTFNGEGACVRVPQSVDGSVPSGACVKSYFCK 108 C HR A+LSKG V+ G + C YHGW ++ +GAC +P + +P A ++ C+ Sbjct: 62 CAHRFAKLSKGCVKQGEAGDRLECPYHGWQYDKDGACRTIPACPELPIPKKARSDAFECE 121 Query: 109 ERYGYVWVALEEP--LRDIPEFPEDGAPGYRRIFQFYERWETSALRMMENSFDNSHFSYV 166 RY VWV L+ + +IP F + G R I W+T+A R EN D SHF++V Sbjct: 122 VRYDIVWVRLDASFGVTEIPVFSDWEEEGMRVIVVDSYVWQTTAERRWENFTDFSHFAFV 181 Query: 167 HRATFGLYDQPKPEKYEIEETDYGFEAETRVPIKNVPASHRVTGSTADTTVRHMFNRWYL 226 H T LYD + G E R I+ P D + R + Sbjct: 182 HPGT--LYDAAYARPPLAPVSRVG--GEMRFSIE--PPKEMTDQLPDDCPIGAFIYRCTM 235 Query: 227 PFVRRFGCTYPESGRHHIIYNCATPIDDGAIMLSQWLYRNDTEEQCSEAELIAWDAPILV 286 P+ +++ + P+DD + R DT++ +A +A+ +L Sbjct: 236 PYTINLEIALYRKPERFVLWTTSCPVDDETCRNFMIIARADTDD--DDATHVAFQKLVLA 293 Query: 287 EDREILEATDP 297 ED+ I+E+ P Sbjct: 294 EDQPIIESQSP 304 >gi|152979928|ref|YP_001352913.1| vanillate monooxygenase, alpha subunit [Janthinobacterium sp. Marseille] Length = 358 Score = 103 bits (257), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 10/170 (5%) Query: 9 LRKFWYALMPVTQLKDGPQPFT--LLGEKLVVWLKEDGSPAALQDRCCHRTARLSKGFVE 66 +R WY ++ G Q T +LGE ++++ KEDGSP AL DRC H+ A LS G ++ Sbjct: 5 IRNAWYVAAWSKEV--GRQYLTRRILGEPVLMYRKEDGSPVALLDRCPHKLAPLSLGELK 62 Query: 67 NGNIVCGYHGWTFNGEGACVRVPQSVDGSVPSGACVKSYFCKERYGYVWVALEEPL---- 122 + CGYHG F+ G CVRVP +P A VKS+ ERY VW+ + E Sbjct: 63 GDIVECGYHGLQFDCSGTCVRVPGQ--PQIPPTAQVKSFPLVERYNAVWIWMGEATLANP 120 Query: 123 RDIPEFPEDGAPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRATFG 172 DI E PG+ I Y ++++ L + +N D +H +YVH+ T G Sbjct: 121 DDIVEVERYQMPGWDLIDGQYLHFKSNYLNITDNLVDPAHTTYVHKNTIG 170 >gi|152981999|ref|YP_001353364.1| hypothetical protein mma_1674 [Janthinobacterium sp. Marseille] Length = 231 Score = 77.8 bits (190), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 52/110 (47%) Query: 31 LLGEKLVVWLKEDGSPAALQDRCCHRTARLSKGFVENGNIVCGYHGWTFNGEGACVRVPQ 90 L G++L +W G +RC HR R + G + + + CGYHGW F G C +P Sbjct: 30 LHGQELALWRNAAGEIQVWANRCPHRGTRFTMGRIVDDQLSCGYHGWRFGSGGQCTYIPA 89 Query: 91 SVDGSVPSGACVKSYFCKERYGYVWVALEEPLRDIPEFPEDGAPGYRRIF 140 P C K++ ERYG +W +L P ++P+ P + +F Sbjct: 90 HPKLPPPKTVCAKTFQAVERYGMIWTSLGAPETEVPQLQALADPEQQSLF 139 >gi|152981877|ref|YP_001355367.1| hypothetical protein mma_3677 [Janthinobacterium sp. Marseille] Length = 580 Score = 74.7 bits (182), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%) Query: 31 LLGEKLVVWLKEDGSPAALQDRCCHRTARLSKGFVENGNIVCGYHGWTF-NGEGACVRVP 89 L G +L +W + G+ ++RC HR RL+ G ++ C YHGW+F +G+G C VP Sbjct: 28 LFGYELALWRDDTGAVNVWENRCPHRGLRLTLGTNTGTDLQCRYHGWSFESGDGGCSFVP 87 Query: 90 QSVDGSVPSGACVKSYFCKERYGYVWVALEEPLRDIPEF 128 D S PS ACV + ER G+VW A +P P+F Sbjct: 88 AHRDDSEPSKACVLTLPVSERNGFVWAAF-DPDTTEPQF 125 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.322 0.138 0.446 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 879,823 Number of extensions: 37180 Number of successful extensions: 88 Number of sequences better than 1.0e-08: 7 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 7 Length of query: 343 Length of database: 1,221,021 Length adjustment: 84 Effective length of query: 259 Effective length of database: 910,473 Effective search space: 235812507 Effective search space used: 235812507 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)