BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0383.p
         (515 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981639|ref|YP_001351991.1| hypothetical protein mma_0301 [...   587   e-169
gi|152981693|ref|YP_001354696.1| M23B family peptidase [Janthino...    90   3e-19

>gi|152981639|ref|YP_001351991.1| hypothetical protein mma_0301
           [Janthinobacterium sp. Marseille]
          Length = 455

 Score =  587 bits (1512), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 288/452 (63%), Positives = 340/452 (75%), Gaps = 2/452 (0%)

Query: 62  SRCCSALQSCHHKVAASSPKTRIIGASALFLAAFTIGAAGFAPAEPDLRDAPVNPISKEL 121
           ++  SA  +    +  SS KTRI+ ASAL LA    GAAG AP  PD  D P+  I++EL
Sbjct: 5   NKLLSASSASKKLLLGSSRKTRIVSASALLLAVCAFGAAGVAPMAPDADDLPIKSITQEL 64

Query: 122 ALPDLQQQISALEERSQYYVNEERVRSGDTLASLLNRLGVDDDEATAFIKSDTLARSVMQ 181
            LP L  QI+AL++  Q Y++EERVRSGDTLA+LL RLGVDDD ATAFIKSD +AR+VMQ
Sbjct: 65  QLPHLADQIAALDKLQQNYISEERVRSGDTLATLLGRLGVDDDAATAFIKSDAVARNVMQ 124

Query: 182 LRAGKRVVAQTDDNGELVKLSATLDDGSDTPKNLVISRQDGKLTAQAQPAVLERRVEMRA 241
           L+AGKRV  QT+++GEL  LS+T   G    KN+ I R+     A  +   +ERR+EMR+
Sbjct: 125 LKAGKRVQVQTNEDGELNWLSSTTGTGVGNLKNIEIRREGKSFKASEKAVAMERRIEMRS 184

Query: 242 GIIYSSLFAATDAAQIPDAVAMQLVDMFATNINFASDLRRGDRFNVVYETYYQNGDLVRT 301
           G I SSLFAATDAAQIPD VA Q+VDMF+TNI+F SDLRRGDRFNVVYET++QNG+ V  
Sbjct: 185 GEIRSSLFAATDAAQIPDNVASQIVDMFSTNIDFGSDLRRGDRFNVVYETFWQNGEYVYA 244

Query: 302 GRVLAGEFDNAGNRYQAVWFSDPASKTGGGGYYAFDGKSLKKAFLKSPLAFTRISSGFSM 361
           GRVLAGEF N    YQ+VWF DP S    GGYY FDGKSLKKAFLKSPL F+RISSGFS+
Sbjct: 245 GRVLAGEFMNGPATYQSVWFDDP-SVASSGGYYGFDGKSLKKAFLKSPLEFSRISSGFSV 303

Query: 362 RLHPILGKWKQHTGVDFAAPTGTPIHAAADGVIDFVGQQNGYGNIVVIKHWSGYSTAYGH 421
           R HPI G WK H GVDFAA  GTPI A+ DGVIDF G Q GYGN+V+IKHWS YSTAY H
Sbjct: 304 RKHPISGLWKAHKGVDFAAAIGTPIRASGDGVIDFAGTQRGYGNVVIIKHWSKYSTAYAH 363

Query: 422 MSRFAPKLKKGMKVSQNDVIGFVGMTGWATGPHLHYEFRVNNQPRNPLSVDVPNNQALTG 481
           MSRFA  L+KG KVSQ  VIG+VGMTGW+TGPHLHYEFRVNN+ R+P++VD+PN Q LT 
Sbjct: 364 MSRFATNLRKGSKVSQGQVIGYVGMTGWSTGPHLHYEFRVNNEARDPMTVDIPNAQPLTA 423

Query: 482 PQLQRFRAVAADMQHRMAMLRVPGAPDVKLAA 513
            Q+Q+FR VA DM HR A+L  P   +V+LAA
Sbjct: 424 SQMQKFRNVANDMTHRFALLS-PENNNVRLAA 454


>gi|152981693|ref|YP_001354696.1| M23B family peptidase
           [Janthinobacterium sp. Marseille]
          Length = 314

 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 349 PLAFTRISSGFSMRLHPILGKWKQHTGVDFAAPTGTPIHAAADGVIDFVGQQNGYGNIVV 408
           P+  +  +S F  RL P  G+   H G+DFAAP GTPI AAA GV+        YGN++ 
Sbjct: 181 PVNVSYNASTFGRRLDPFSGRSAMHEGIDFAAPIGTPIVAAAGGVVTVAEFHPQYGNMME 240

Query: 409 IKHWSGYSTAYGHMSRFAPKLKKGMKVSQNDVIGFVGMTGWATGPHLHYEFRVNNQPRNP 468
           I H +   T Y H SR    ++ G  V +   I  +G TG +TGPHLH+E RV    ++P
Sbjct: 241 IDHGNDMITRYAHTSRLL--MQVGDIVRRGQHIADIGTTGRSTGPHLHFEVRVKGVAQDP 298


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.133    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,224,803
Number of extensions: 52556
Number of successful extensions: 132
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 132
Number of HSP's successfully gapped: 2
Length of query: 515
Length of database: 1,221,021
Length adjustment: 87
Effective length of query: 428
Effective length of database: 899,382
Effective search space: 384935496
Effective search space used: 384935496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 132 (55.5 bits)