BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0380.p
         (321 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980712|ref|YP_001354650.1| Mg2+/Co2+ transporter [Janthino...   565   e-162
gi|152981076|ref|YP_001351774.1| Mg2+/Co2+ transporter [Janthino...    75   7e-15

>gi|152980712|ref|YP_001354650.1| Mg2+/Co2+ transporter
           [Janthinobacterium sp. Marseille]
          Length = 321

 Score =  565 bits (1456), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 269/321 (83%), Positives = 296/321 (92%)

Query: 1   MINVFVLQNGRLSQVNIDSRTDLEQAAPVWVDLTEPNDEERAWVKSIYGVTLPDEDEFSD 60
           MINVFVLQNGRL+Q+NID+R DLE+A PVWVDLT+PND+ERAWVKSIYGVTLP ED+  D
Sbjct: 1   MINVFVLQNGRLNQINIDTREDLEKATPVWVDLTDPNDDERAWVKSIYGVTLPGEDDVKD 60

Query: 61  IEASARYFEAENGDLHLRTDFLFEGDDDTSSTMTVAFILARNILFSVHAEDLPVFRLVRM 120
           IEASARY+E ENGDLHLRTDFL E DD  S  +TVAFILAR+ILFSVH EDLP+FRLVRM
Sbjct: 61  IEASARYYEGENGDLHLRTDFLLEEDDGPSRVVTVAFILARDILFSVHPEDLPIFRLVRM 120

Query: 121 RARSRPGSIGDYRDVLLDLYETDAEYSADALEGIYQKLEAVSTSVLKKSLSDQDAAEVLN 180
           RARSRPGSI DY+DVLLDLY TDAEYSADALEG+YQ L+ VS SVL++ LSDQDAA  LN
Sbjct: 121 RARSRPGSIADYKDVLLDLYATDAEYSADALEGVYQSLDEVSRSVLQEELSDQDAAVALN 180

Query: 181 TIAHEEDLNGRIRRNMMDTRRAVSFLMRGRLLSSEQFEDARQILRDIESLDGHTAFLFDK 240
            IAHEEDLNGRIRRNMMDTRRAVSFLMRGRLL++EQFE+ARQI+RDIESLDGHTAFLFDK
Sbjct: 181 AIAHEEDLNGRIRRNMMDTRRAVSFLMRGRLLNAEQFEEARQIMRDIESLDGHTAFLFDK 240

Query: 241 INFLMDATVGFININQNKIIKIFSVASVAFLPPTLIASIYGMNFKVMPELDWAVGYPLAI 300
           INFLMDATVGFININQNKIIKIFSVASVAFLPPTLIASIYGMNF++MPELDW++GYPLAI
Sbjct: 241 INFLMDATVGFININQNKIIKIFSVASVAFLPPTLIASIYGMNFRLMPELDWSLGYPLAI 300

Query: 301 LMMVGSAIAPFWYFRRRGWLN 321
           +MM+ SA+ PFWYFRRRGWL 
Sbjct: 301 VMMIASAVTPFWYFRRRGWLK 321


>gi|152981076|ref|YP_001351774.1| Mg2+/Co2+ transporter
           [Janthinobacterium sp. Marseille]
          Length = 321

 Score = 74.7 bits (182), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 143/346 (41%), Gaps = 52/346 (15%)

Query: 1   MINVFVLQNG-RLSQVNIDSRTDLEQA--APVWVDLTEPNDEERAWVKSIY--------- 48
           +IN  V Q+G +LS + I+  +D  Q     VWV L +    E A ++  +         
Sbjct: 2   LINCVVYQDGNKLSDIPIEEISDYLQRPDCFVWVALKDAEPAELAQMQEEFNLHELAVED 61

Query: 49  ---GVTLPDEDEFSD-IEASARYFEAENGDLHLRTDFLFEGDDDTSSTMTVAFILARNIL 104
              G   P  +E+ D +    +  E  +G+LH+    +F G               +N +
Sbjct: 62  ARNGHQRPKIEEYGDSLFTVVKTAEMIDGELHIGEIDIFTG---------------KNYV 106

Query: 105 FSVHAEDLPVFRLVRMRARSRPGSIGDYRD-VLLDLYETDAEYSADALEGIYQKLEAVST 163
            SV       F  VR R    P  +      VL  L +   +     +E +  +LE +  
Sbjct: 107 LSVRNRSNQGFLGVRARCEQEPEQLRKGSAFVLYALMDAVVDRYFPVVESLEAELETIEG 166

Query: 164 SVLKKSLSDQDAAEVLNTIAHEEDLNGRIRRNMMDTRRAVSFLMR--GRLLSSEQ---FE 218
            +  K L+  +   + +           ++R ++  +  V+ LM   G+L         E
Sbjct: 167 KIFDKGLARLNIERLYD-----------LKRQVVMLKHVVAPLMEAVGKLSGGRVPALCE 215

Query: 219 DARQILRDIES----LDGHTAFLFDKINFLMDATVGFININQNKIIKIFSVASVAFLPPT 274
             R   RD+      ++  T  + D +   +   +  + I ++++ K  +  +  F   T
Sbjct: 216 STRDYFRDVGDHLYRINALTDAIRDTVATAIQVNLSMVTIEESEVNKRLAAWAAIFAVAT 275

Query: 275 LIASIYGMNFKVMPELDWAVGYPLAILMMVGSAIAPFWYFRRRGWL 320
               ++GMNFK MPELDW  GYP+A+L++VG     ++ F++ GWL
Sbjct: 276 AFFGLWGMNFKFMPELDWKYGYPVAVLLVVGVCGYLYYRFKKSGWL 321


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.137    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 682,954
Number of extensions: 25482
Number of successful extensions: 86
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 2
Length of query: 321
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 238
Effective length of database: 914,170
Effective search space: 217572460
Effective search space used: 217572460
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)