BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0368.p (173 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982711|ref|YP_001354659.1| thioredoxin-related transmembra... 196 6e-52 gi|152983130|ref|YP_001354755.1| thiol:disulfide interchange pro... 70 9e-14 gi|152982733|ref|YP_001352917.1| PHP-like metal-dependent phosph... 59 2e-10 gi|152982477|ref|YP_001352145.1| hypothetical protein mma_0455 [... 59 2e-10 gi|152982120|ref|YP_001351900.1| hypothetical protein mma_0210 [... 55 2e-09 >gi|152982711|ref|YP_001354659.1| thioredoxin-related transmembrane protein [Janthinobacterium sp. Marseille] Length = 173 Score = 196 bits (498), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 88/171 (51%), Positives = 121/171 (70%), Gaps = 2/171 (1%) Query: 5 KNIVLLAVVAVLCVGVGLYASQRLHPADSPQTLALNQLLSQSLPDVSGQPQALAQYRGKP 64 +N++L +AV +G+Y + H +P++ A+ +Q + D +G+ L +++GK Sbjct: 3 RNVLLFGAIAVFFAAIGIYFGDKHHSPAAPESPAVATFFAQQMEDSAGKMHTLGEWQGKT 62 Query: 65 LIVNFWATWCGPCVEEMPELTALQQEIA--PVQILGIGVDSQENIAKFAQKYQIRYPLFA 122 LIVNFWATWC PCVEEMPELT LQ E+A +QILG+G+DS NI +FA KY+I YPL+ Sbjct: 63 LIVNFWATWCAPCVEEMPELTELQTELAGKNIQILGVGIDSPSNIREFAAKYKITYPLYI 122 Query: 123 AGTGATDLLRQFGNQAGGLPFTALVGKDGKVKKVYLGRLKFDELRADLSRL 173 AG ++L RQFGNQAGGLPFT ++G G V+K YLGRLK D+LRAD++ L Sbjct: 123 AGLTGSELSRQFGNQAGGLPFTVIIGPKGDVRKTYLGRLKMDQLRADIAAL 173 >gi|152983130|ref|YP_001354755.1| thiol:disulfide interchange protein [Janthinobacterium sp. Marseille] Length = 279 Score = 69.7 bits (169), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 16/175 (9%) Query: 3 KLKNIVLLAVVA-VLCVGVGLYASQRLHPADSPQTLALNQLLSQSLPDVSGQPQALAQYR 61 +L+ V+ +++ + +GLY Q ++P ++P+ L + D G P L+ + Sbjct: 104 QLRKPVIFGIISGAFALNIGLYL-QSVNPDNAPR------LPTTVFSDSDGGPVTLSDIQ 156 Query: 62 GKPLIVNFWATWCGPCVEEMPELTALQQEIAPVQILGIGV-DSQENIAKFAQKYQIRYPL 120 +P++VN WA+WC PC EMP ++ V+ + + +SQ + KF +K ++ + Sbjct: 157 KRPVVVNLWASWCPPCRREMPAFRRAEEAFPEVKFVMLNQGESQAVVFKFLEKEKLEFEH 216 Query: 121 FAAGTGATDLLRQFGNQAGGLPFTALVGKDGKVKKVYLGRLK----FDELRADLS 171 G+ L+R+ + GLP T +G++ ++G +D LR + + Sbjct: 217 MVLDRGSL-LMRE--ARISGLPTTLFFDSEGRLMDRHMGEFTLPALYDSLRRNFN 268 >gi|152982733|ref|YP_001352917.1| PHP-like metal-dependent phosphoesterase [Janthinobacterium sp. Marseille] Length = 352 Score = 58.9 bits (141), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 31/195 (15%) Query: 1 MKKLKNI-VLLAVVAVLCVGVGLYASQRLHPADSPQTLALNQLLSQSLP----------- 48 M ++K+ V+L + +L G++ + H AD + +N+ S++L Sbjct: 1 MMRIKHCKVVLGQLLILVTCAGIFTTA--HAADGAKPAVVNEGESRALSAGQSLIGAPGP 58 Query: 49 -----DVSGQPQALAQYRGK-PLIVNFWATWCGPCVEEMPELTAL-QQEIAPVQILGIGV 101 + G+ L GK P+ + FWATWC PC E+MP + Q+E ++++ I Sbjct: 59 YVKLKTIDGKQIDLGAIYGKQPVYLKFWATWCIPCREQMPAFERVYQEEGKRIKVIAINA 118 Query: 102 ---DSQENIAKFAQKYQIRYPLFAAGTGATDLLRQFGNQAGGLPFTALVGKDGKVKKVYL 158 D++ I ++ +K + P+ L R F + P L+ KDG++ ++ Sbjct: 119 GFSDNEAAIQEYKKKIPMHMPIV---IDDGSLARSFNIRV--TPTHVLIDKDGRI--AHI 171 Query: 159 GRLKFDELRADLSRL 173 G L+ D+ A L+++ Sbjct: 172 GHLEDDKFHAALAKV 186 >gi|152982477|ref|YP_001352145.1| hypothetical protein mma_0455 [Janthinobacterium sp. Marseille] Length = 171 Score = 58.5 bits (140), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 20/168 (11%) Query: 12 VVAVLCVGVGLYASQRLHPADSPQTLALNQLLSQSLPDVSGQPQALAQYRGKPLIVNFWA 71 ++A + VG +YA+ + P D+P L L +S+ P +L RGK ++++++A Sbjct: 14 LLASMAVGGWVYAAD-VRPGDTPVLPTLTTLDGKSI-----HPASL---RGKVVVISYFA 64 Query: 72 TWCGPCVEEMPELTAL-QQEIAPVQILGIGVDS-----QENIAKFAQKYQIRYPLFAAGT 125 ++C C E P+L L + + ++G+ +++ ++ K+ QKYQ+ +P+ T Sbjct: 65 SYCPFCANEAPKLQKLYSKNTDKLIVIGVNIETKDPQQKDKALKWVQKYQLTHPV---TT 121 Query: 126 GATDLLRQFGNQAGGLPFTALVGKDGKVKKVYLGRLKFDELRADLSRL 173 L R G + GLP + K G +++V +G + FDE D+++ Sbjct: 122 DYLALERVLGKRQ-GLPVNYVFDKRGMLRRVDVGEI-FDEDFDDIAKF 167 >gi|152982120|ref|YP_001351900.1| hypothetical protein mma_0210 [Janthinobacterium sp. Marseille] Length = 177 Score = 55.5 bits (132), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 12/137 (8%) Query: 45 QSLPDVS-----GQPQALAQYRGKPLIVNFWATWCGPCVEEMPELTALQQEIAPVQILGI 99 ++PDV+ G+ RGK +++NFWAT C CV+EMPE+ + + I Sbjct: 40 DAIPDVTFTNLQGKKITSQDLRGKVVMINFWATSCVTCVKEMPEMVDTYNKYKDSGLEFI 99 Query: 100 GV----DSQENIAKFAQKYQIRYPLFAAGTGATDLLRQFGNQAGGLPFTALVGKDGKVKK 155 V D + F + ++ + + G +L + FG+ P T +V KDG V K Sbjct: 100 AVAMAYDPPNYVLNFVETRKLPFTIALDTQG--ELAKSFGD-IKLTPTTLVVDKDGHVIK 156 Query: 156 VYLGRLKFDELRADLSR 172 Y+G F L L + Sbjct: 157 RYVGEPDFAALHQLLEK 173 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.138 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 379,535 Number of extensions: 16008 Number of successful extensions: 66 Number of sequences better than 1.0e-08: 7 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 7 Length of query: 173 Length of database: 1,221,021 Length adjustment: 77 Effective length of query: 96 Effective length of database: 936,352 Effective search space: 89889792 Effective search space used: 89889792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)