BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0331.p
         (429 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980989|ref|YP_001355123.1| hemolysin [Janthinobacterium sp...   151   6e-38
gi|152980041|ref|YP_001352118.1| Mg2+ and Co2+ transporter [Jant...   108   6e-25

>gi|152980989|ref|YP_001355123.1| hemolysin [Janthinobacterium sp.
           Marseille]
          Length = 443

 Score =  151 bits (382), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 213/443 (48%), Gaps = 39/443 (8%)

Query: 13  LLILILLSAFFSMTETALMAANRHRLRHLAKQGNRAAITILWLLDRTERLLSLILIANTV 72
           +L LIL++  F+M+E A++ + R RL+ L++ G+R A   L L D   R LS I +  T+
Sbjct: 6   ILGLILVNGVFAMSEIAIVTSKRIRLQKLSENGSRGAQAALDLSDSPSRFLSTIQVGITL 65

Query: 73  INAL---------------ATALVTALAIAAFGNHQRVITAATAFVAALLIVFAEIVPKV 117
           I                    AL+  L + A      V+     F +   ++  E+VPK 
Sbjct: 66  IGIFNGAFGEASLVERLTPEVALIPVLNVYAREIALGVVVVGITFAS---LILGELVPKR 122

Query: 118 IGATHPERIALFTSFILKPLMRVAKPLVWFVNIFVSAILKLLHIKTGARAAEQRISPEEL 177
           I   +PE +A   S +  P++ +++ +  FV +       +L +       +  ++ EE+
Sbjct: 123 IAMQYPEVVA---SVVAAPMLWLSRLMGPFVKVLTGTTEFILRVLGMHHKKDDAVTEEEI 179

Query: 178 RSIVLEG---GSFIPQKHKSILLNLFDLEKISVEDVMTPRAQVEALNLAAPVEDILHQLA 234
             +  EG   G F   +H  I+     L+   V  +MTPR  V  ++L  P+E  L ++A
Sbjct: 180 AGLFREGTDAGLFEKTEH-DIVSRALRLDDQRVAGLMTPRLDVHFIDLEDPIEVNLAKIA 238

Query: 235 TCYHNKLPVFEGEINHIVGILHVRKTVSLFRQE---EEISHDDIRALLSAPYYVPVETDI 291
              +N+ PV +G+I+H++GI+H     SLF Q    + I+  DI A    P +VP     
Sbjct: 239 DSSYNRFPVCKGDISHVIGIVHAG---SLFEQAIRGKAINTVDIAAATRPPLFVPETISA 295

Query: 292 FTQLQYFQENHERLGIVVDEYGEVQGLVTLEDIIEEMIGEFTTSSPGSSGEGFNWDKEGT 351
              L+  ++N   L +V+DEYGE++G+VTL D++  ++G+ +        +G   D +G+
Sbjct: 296 MQLLETLKKNRAELALVIDEYGEIEGIVTLSDVLGALVGDVSVIDEHHEVDGVRRD-DGS 354

Query: 352 CLLEGSTTLRDINKRL--GLKLPLDGPKTIN---GLLLETLQDIPEASVAVKIDGCVIEI 406
            L++G  +     + L   ++ P +   T +   G ++  L  IP+ S + + +G  IE+
Sbjct: 355 WLIDGGVSFDRFRELLETDVRFPEEASGTYHTLAGFVMTFLGHIPQMSDSFEWEGYRIEV 414

Query: 407 VQVQNQAIRMVKLIALPPPTTPD 429
           V +    I  + +  L P   PD
Sbjct: 415 VDMDRNRIDRLLITKLDP--GPD 435


>gi|152980041|ref|YP_001352118.1| Mg2+ and Co2+ transporter
           [Janthinobacterium sp. Marseille]
          Length = 296

 Score =  108 bits (270), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 194 SILLNLFDLEKISVEDVMTPRAQVEALNLAAPVEDILHQLATCYHNKLPVFEGEINHIVG 253
           +++  +F + ++S  D+M PRAQ++ +++  P+E+ L  + +  H++ P  +GE + +VG
Sbjct: 56  AMIEGVFQVSELSARDIMVPRAQMDVVDITKPIEEWLPMVLSTAHSRFPAVDGERDKVVG 115

Query: 254 ILHVRKTVSLFRQEEEISHDDIRALLSAPYYVPVETDIFTQLQYFQENHERLGIVVDEYG 313
           IL  +  +  + +E      DIR +L    ++P    +   L  F+  H  + IVVDEYG
Sbjct: 116 ILMAKDLLRYYAEESF----DIRRMLRTAVFIPESKRLNVLLGDFRAKHNHMAIVVDEYG 171

Query: 314 EVQGLVTLEDIIEEMIGEFTTSSPGSSGEGFNWDKEGTCLLEGS-----------TTLRD 362
            V GL+T+ED++E+++G+            F+ D++    ++             T +  
Sbjct: 172 GVAGLITIEDVLEQIVGDIEDEY------DFDNDEDNILSIKAGEHGPRWRVKALTEIAQ 225

Query: 363 INKRLGLKLPLDGPKTINGLLLETLQDIPEASVAVKIDGCVIEIVQVQNQAIRMVKLIAL 422
            N+ LG+ L      TI G + + L  +P     + ID    EI++   + I +V +  L
Sbjct: 226 FNEELGVSLFNPDVDTIGGYIADHLGRMPHKGEVLDIDDLRFEILRADARHIHVVLVEKL 285

Query: 423 PPPTTPD 429
           PP  + D
Sbjct: 286 PPAVSED 292


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 885,883
Number of extensions: 33974
Number of successful extensions: 99
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 2
Length of query: 429
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 343
Effective length of database: 903,079
Effective search space: 309756097
Effective search space used: 309756097
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 131 (55.1 bits)