BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0314.p
         (396 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980453|ref|YP_001354700.1| FtsZ cell division protein [Jan...   655   0.0  

>gi|152980453|ref|YP_001354700.1| FtsZ cell division protein
           [Janthinobacterium sp. Marseille]
          Length = 394

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/396 (88%), Positives = 374/396 (94%), Gaps = 2/396 (0%)

Query: 1   MEIDMVDNATLGTIIKVVGVGGAGGNAVQHMINKGVSGVEFIAANTDAQALKQSKAHNVI 60
           MEIDM++N   GT+IKVVGVGGAGGNAVQHMINKGV+GVEFI ANTDAQAL+ SKAHN+I
Sbjct: 1   MEIDMLENVAQGTVIKVVGVGGAGGNAVQHMINKGVNGVEFIVANTDAQALQLSKAHNII 60

Query: 61  QIGDTGLGAGMQPEIGRRLAEETRARIEDSLRGAHMVFIAAGMGGGTGTGAAPVVAQVAK 120
           QIG+TGLGAGM+P +GR+LAEETR RIED+LRGAHMVFIAAGMGGGTGTGAAP++AQ+AK
Sbjct: 61  QIGETGLGAGMKPAVGRQLAEETRPRIEDALRGAHMVFIAAGMGGGTGTGAAPIIAQIAK 120

Query: 121 SLGALTVAVVSKPFSYEGQKCMDIADAGLEELSQHVDSLIIILNEKLEEIYEDDSMIEWL 180
             GALTVAVVSKPFSYEG+KCMDIAD GLE L QHVDSLIIILNEKLEEIYEDDSMIEWL
Sbjct: 121 EQGALTVAVVSKPFSYEGKKCMDIADEGLEALGQHVDSLIIILNEKLEEIYEDDSMIEWL 180

Query: 181 SHADDVLNNAVAGIAEIINVPGHINVDFNDVKTIMGEQGKAMMGTATAAGVDRARVAAEQ 240
            HADDVLNNAVAGIAEIINVPGHINVDFNDVKTIMGEQGKAMMGTATA G+DRAR+AAEQ
Sbjct: 181 QHADDVLNNAVAGIAEIINVPGHINVDFNDVKTIMGEQGKAMMGTATAQGIDRARIAAEQ 240

Query: 241 AVASPLLDGIDLSGARGVLVNVTASRSLKGKEIKEVMATVRAFAAPDASIAQGIAYDDGM 300
           AVASPLLDGIDLSGARGVLVNVTASRSLKGKEIKEVMATVRAFAAPDASIAQGIAYDD M
Sbjct: 241 AVASPLLDGIDLSGARGVLVNVTASRSLKGKEIKEVMATVRAFAAPDASIAQGIAYDDEM 300

Query: 301 GDEIRVTVVATGLGRARKAVQLVQTPVMRTGTHNEPMMAVGGNLQQGAAQPAGAAFGGLK 360
           GD+IRVTVVATGLGR+RK VQLVQTP++RTGTHNEPMMA  G L QGAAQPA A+F GLK
Sbjct: 301 GDDIRVTVVATGLGRSRKGVQLVQTPMLRTGTHNEPMMANTGML-QGAAQPA-ASFDGLK 358

Query: 361 APAVWRRESASDTVRALEKNGMETYDIPAFLRKQAD 396
           APAVWRRESASDTVRALEKNGMETYDIPAFLRKQAD
Sbjct: 359 APAVWRRESASDTVRALEKNGMETYDIPAFLRKQAD 394


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.315    0.132    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 703,147
Number of extensions: 22934
Number of successful extensions: 87
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 311
Effective length of database: 906,776
Effective search space: 282007336
Effective search space used: 282007336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 130 (54.7 bits)