BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0313.p
         (410 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980244|ref|YP_001354701.1| FtsA cell division protein [Jan...   771   0.0  

>gi|152980244|ref|YP_001354701.1| FtsA cell division protein
           [Janthinobacterium sp. Marseille]
          Length = 410

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/410 (91%), Positives = 398/410 (97%)

Query: 1   MTKDAKNLIVGLDIGTSKVVAVVAEVLPDGRHEVIGLGQSESKGLKKGVVVNIEATVESI 60
           MTKDAKNLIVGLDIGTSKVVAVVAEV+P+GRHEVIGLGQ ESKGLKKGVVVNIEATVESI
Sbjct: 1   MTKDAKNLIVGLDIGTSKVVAVVAEVMPNGRHEVIGLGQHESKGLKKGVVVNIEATVESI 60

Query: 61  QRALEEAELMADCKIRNVYTGIAGSHIRSFNSSGMVAIKDKEVTAADVSRVIETAKAVNI 120
           QRALEEAELMADCKIRNVYTGIAGSHIRSFNSSGMVAIKDKEVTA DV+RVIETAKAVNI
Sbjct: 61  QRALEEAELMADCKIRNVYTGIAGSHIRSFNSSGMVAIKDKEVTATDVARVIETAKAVNI 120

Query: 121 PTDQQLLHTVPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKCVRRCGLE 180
           PTDQQLLHTVPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKC+RRCGLE
Sbjct: 121 PTDQQLLHTVPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKCIRRCGLE 180

Query: 181 VSDLILQPMASADSVLTTDERELGVVLVDIGGGTTDVAVFTEGAIRHTAVIPIAGDQITN 240
           VSDLILQPMASA++VLT DE+ELGVVL+DIGGGTTDVA+FTEGAIRHTAVIPIAGDQITN
Sbjct: 181 VSDLILQPMASAEAVLTADEKELGVVLIDIGGGTTDVAIFTEGAIRHTAVIPIAGDQITN 240

Query: 241 DIAMALRTPTLEAEEIKLRYGVAKQILADPTETLEVPGLGDRNPRTLSRQALAAVIEPRV 300
           DIAMA+RTPT EAEEIKLRYG+AKQ+LADP ETLEVPGLGDR  R LSRQALAAVIEPR+
Sbjct: 241 DIAMAVRTPTAEAEEIKLRYGMAKQVLADPGETLEVPGLGDRGTRALSRQALAAVIEPRI 300

Query: 301 EELFALVHQVVRESGYEEVLSSGIVLTGGSAMMPGMTELAEDIFLKPARLGTPEYSGQLA 360
           EELF+LVHQVVRESGYEEVLSSGIVLTGG+AMMPGM ELAEDIFLKPARLGTPEY+GQLA
Sbjct: 301 EELFSLVHQVVRESGYEEVLSSGIVLTGGTAMMPGMVELAEDIFLKPARLGTPEYNGQLA 360

Query: 361 DVVRSPRYSTVLGLLQEAKKQYLRGYIVTRQEGSVKAVWQRMKEWFLGNF 410
           DVVRSPRY+TVLGLL EAKKQYLRG+IVTRQ+GS  A+++RMKEWFLGNF
Sbjct: 361 DVVRSPRYATVLGLLLEAKKQYLRGHIVTRQDGSTVAIFRRMKEWFLGNF 410


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.134    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 916,265
Number of extensions: 37389
Number of successful extensions: 156
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 157
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 325
Effective length of database: 906,776
Effective search space: 294702200
Effective search space used: 294702200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 131 (55.1 bits)