BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0312.p
         (256 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980000|ref|YP_001354702.1| FtsQ cell division protein [Jan...   343   5e-96

>gi|152980000|ref|YP_001354702.1| FtsQ cell division protein
           [Janthinobacterium sp. Marseille]
          Length = 255

 Score =  343 bits (880), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 160/255 (62%), Positives = 199/255 (78%)

Query: 1   MWQDVKMLNAISSALFALVLLALLASGLWWVAQRPMFTLHTIRIESASDLPLEKVNALTV 60
           MWQD++ LNA ++ALF LV LAL++  LWW+AQRP FTL  IRIE A    L  +N LTV
Sbjct: 1   MWQDIRTLNATANALFGLVALALVSCCLWWIAQRPYFTLKVIRIEGAEQAQLRHINPLTV 60

Query: 61  RATAVPRIHGNFFTADLTAVRAAFEAVPWVRKAMVRREWPDRLVVKIEEHKALGTWGEDG 120
           R+  + RI GNFFTA+L  VR  FE+VPWVRKA VRR+WP++L V +EEH  LGTWGEDG
Sbjct: 61  RSAVLARIKGNFFTANLDTVRQTFESVPWVRKATVRRDWPNQLTVTLEEHTPLGTWGEDG 120

Query: 121 KLLSQKGDVFTANLAEAEDDGDLLEFDGPPGSEKQVVARLAQFRQWFAPIKLEPESVVLS 180
           +LLS KGDVFTANLAEAE+D +LL F+GP GSEK+VVARL    +WFAP+ L  E++ LS
Sbjct: 121 RLLSTKGDVFTANLAEAEEDANLLAFNGPVGSEKEVVARLNDLNEWFAPLNLSAEALSLS 180

Query: 181 NRYAWTVRLDNGMTVELGREQGDAVLKERVARLVAVYPQLMERLQGKIESVDLRYPNGMA 240
            RYAWT++L NG+TVELGRE+ +  LKERV RLV +YPQL+ RLQ +IES+D+RYPNG+A
Sbjct: 181 GRYAWTLKLSNGVTVELGREKSNTTLKERVDRLVGIYPQLLARLQDRIESIDMRYPNGLA 240

Query: 241 LKADGLVLAAMNGKK 255
           LKA GL + + + KK
Sbjct: 241 LKAQGLKVGSDSKKK 255


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 551,404
Number of extensions: 21207
Number of successful extensions: 63
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 175
Effective length of database: 921,564
Effective search space: 161273700
Effective search space used: 161273700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)