BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0302.p
         (90 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980159|ref|YP_001354712.1| FtsL cell division protein [Jan...   129   3e-32

>gi|152980159|ref|YP_001354712.1| FtsL cell division protein
          [Janthinobacterium sp. Marseille]
          Length = 90

 Score =  129 bits (325), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 76/90 (84%)

Query: 1  MIGRLCILLTILLVACALSVVSAQYKARSLFIELERSQSAARQLDVDWAQLQLDQSTLGK 60
          M GR+  +L  +LVACALSVV+A Y+ R LFIELER+Q+ ARQLD++WAQLQLDQSTLGK
Sbjct: 1  MSGRISFVLCFILVACALSVVNAHYQFRRLFIELERAQAQARQLDIEWAQLQLDQSTLGK 60

Query: 61 NARIEELARRDLGMVPVTAARTQYLTVGAQ 90
          +ARIE  ARRDL MVPV+ A TQYLT+GA+
Sbjct: 61 HARIEGNARRDLRMVPVSPASTQYLTMGAK 90


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.133    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 168,446
Number of extensions: 4874
Number of successful extensions: 29
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 90
Length of database: 1,221,021
Length adjustment: 60
Effective length of query: 30
Effective length of database: 999,201
Effective search space: 29976030
Effective search space used: 29976030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 122 (51.6 bits)